RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, human

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LITAF-218	ENST00000576036	NMD3	Q96D46	503 aa	Known RBP	13.8	□□□□□ -0.2
LITAF-218	ENST00000576036	ZNF837	Q96EG3	531 aa	Predicted RBP	13.8	□□□□□ -0.2
LITAF-218	ENST00000576036	KATNB1	Q9BVA0	655 aa		13.8	□□□□□ -0.2
LITAF-218	ENST00000576036	PLA2G12A	Q9BZM1	189 aa		13.8	□□□□□ -0.2
LITAF-218	ENST00000576036	LINC00470	Q9BZP3	86 aa		13.8	□□□□□ -0.2
LITAF-218	ENST00000576036	OR52D1	Q9H346	318 aa		13.8	□□□□□ -0.2
LITAF-218	ENST00000576036	TXNIP	Q9H3M7	391 aa		13.8	□□□□□ -0.2
LITAF-218	ENST00000576036	S100A14	Q9HCY8	104 aa		13.8	□□□□□ -0.2
LITAF-218	ENST00000576036	ASH1L	Q9NR48	2969 aa	Known RBP	13.8	□□□□□ -0.2
LITAF-218	ENST00000576036	ELOVL5	Q9NYP7	299 aa		13.8	□□□□□ -0.2
LITAF-218	ENST00000576036	PDP1	Q9P0J1	537 aa	Predicted RBP	13.8	□□□□□ -0.2
LITAF-218	ENST00000576036	REV1	Q9UBZ9	1251 aa		13.8	□□□□□ -0.2
LITAF-218	ENST00000576036	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.8	□□□□□ -0.2
LITAF-218	ENST00000576036	MGAT4B	Q9UQ53	548 aa		13.8	□□□□□ -0.2
LITAF-218	ENST00000576036	ADAM18	Q9Y3Q7	739 aa		13.8	□□□□□ -0.2
LITAF-218	ENST00000576036	ADGRG4	Q8IZF6	3080 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	GNGT2	O14610	69 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	E2F6	O75461	281 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	NDUFB2	O95178	105 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	CNOT4	O95628	575 aa	Known RBP	13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	CD14	P08571	375 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	PGA4	P0DJD7	388 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	PGA3	P0DJD8	388 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	PSMB1	P20618	241 aa	Known RBP	13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	UGT2B10	P36537	528 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	IFNGR2	P38484	337 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	PRPS1	P60891	318 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	ERVK-25	P63136	954 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	FAP	Q12884	760 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	CAMK2D	Q13557	499 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	CARD17	Q5XLA6	110 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	ZFP1	Q6P2D0	407 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	FAHD1	Q6P587	224 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	SMARCD3	Q6STE5	483 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	CD300LD	Q6UXZ3	194 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	STK32C	Q86UX6	486 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	OR5K1	Q8NHB7	308 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	FANK1	Q8TC84	345 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	HDAC2	Q92769	488 aa	Known RBP	13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	NRBF2	Q96F24	287 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	SAMD8	Q96LT4	415 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	MRPL13	Q9BYD1	178 aa	Known RBP	13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	EGLN3	Q9H6Z9	239 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	NRIP3	Q9NQ35	241 aa		13.79	□□□□□ -0.2
LITAF-218	ENST00000576036	ZNF346	Q9UL40	294 aa	Known RBP	13.79	□□□□□ -0.2
LITAF-218	ENST00000576036		A0A1W2PRG6	482 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	SLC43A1	O75387	559 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	TRMU	O75648	421 aa	Known RBP	13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	BCL10	O95999	233 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	FCGR1A	P12314	374 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	RPL27	P61353	136 aa	Known RBP	13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	SORD	Q00796	357 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	TOP3A	Q13472	1001 aa	Predicted RBP	13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	HIST3H3	Q16695	136 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	RFX4	Q33E94	735 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	SFRP5	Q5T4F7	317 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	KLHL17	Q6TDP4	642 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	RASSF6	Q6ZTQ3	369 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	DMRTC2	Q8IXT2	367 aa	Predicted RBP	13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	CLDN22	Q8N7P3	220 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	POMGNT2	Q8NAT1	580 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	CENPN	Q96H22	339 aa	Predicted RBP	13.78	□□□□□ -0.2
LITAF-218	ENST00000576036		Q96M85	177 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	ADAD1	Q96M93	576 aa	Known RBP	13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	KCNK17	Q96T54	332 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	SEMA6A	Q9H2E6	1030 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	NELFA	Q9H3P2	528 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	GPR35	Q9HC97	309 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	CDH10	Q9Y6N8	788 aa		13.78	□□□□□ -0.2
LITAF-218	ENST00000576036	IGKV1D-43	A0A0B4J1Z2	117 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	RPL36A-HNRNPH2	H7BZ11	118 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	IMPA2	O14732	288 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	LYZL6	O75951	148 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	PPP1R3D	O95685	299 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	ACADS	P16219	412 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	DAP	P51397	102 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	DAP3	P51398	398 aa	Known RBP	13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	P2RY6	Q15077	328 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	MEST	Q5EB52	335 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	C9orf135	Q5VTT2	229 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	LRFN4	Q6PJG9	635 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	SEZ6L2	Q6UXD5	910 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	UBE2J2	Q8N2K1	259 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	ARIH2OS	Q8N7S6	290 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	NOXO1	Q8NFA2	376 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	RASD2	Q96D21	266 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	SLC25A44	Q96H78	314 aa	Predicted RBP	13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	LRR1	Q96L50	414 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	POLDIP3	Q9BY77	421 aa	Known RBP	13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	GABARAPL1	Q9H0R8	117 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	ASB6	Q9NWX5	421 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	IL20	Q9NYY1	176 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	OAZ3	Q9UMX2	235 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	HECTD1	Q9ULT8	2610 aa		13.77	□□□□□ -0.21
LITAF-218	ENST00000576036	TEX13C	A0A0J9YWL9	993 aa		13.76	□□□□□ -0.21
LITAF-218	ENST00000576036	SAC3D1	A6NKF1	404 aa		13.76	□□□□□ -0.21
LITAF-218	ENST00000576036	C16orf97	H3BN30	126 aa		13.76	□□□□□ -0.21

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