RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 OR6K3Q8NGY3 331 aa13.27□□□□□ -0.28
SCARF1-209ENST00000576012 FGF13Q92913 245 aa13.27□□□□□ -0.28
SCARF1-209ENST00000576012 NIT2Q9NQR4 276 aa13.27□□□□□ -0.28
SCARF1-209ENST00000576012 RASL12Q9NYN1 266 aa13.27□□□□□ -0.28
SCARF1-209ENST00000576012 FLRT3Q9NZU0 649 aa13.27□□□□□ -0.28
SCARF1-209ENST00000576012 FITM1A5D6W6 292 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 ELOA3DA6NLF2 546 aaPredicted RBP13.27□□□□□ -0.29
SCARF1-209ENST00000576012 DUXAA6NLW8 204 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 OR5K4A6NMS3 321 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 TBX19O60806 448 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 EIF3GO75821 320 aaKnown RBP eCLIP13.27□□□□□ -0.29
SCARF1-209ENST00000576012 OR4E1P0C645 316 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 OR2T7P0C7T2 308 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 CSF2RBP32927 897 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 CCR4P51679 360 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 EEF1A1P68104 462 aaKnown RBP13.27□□□□□ -0.29
SCARF1-209ENST00000576012 PDZK1IP1Q13113 114 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 MLC1Q15049 377 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 ELOA3BQ3SY89 546 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 PRAMEF17Q5VTA0 474 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 LEG1Q6P5S2 330 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 LRRC69Q6ZNQ3 347 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 NUDT18Q6ZVK8 323 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 ELOA3Q8NG57 546 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 OR2T27Q8NH04 317 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 TSEN15Q8WW01 171 aaKnown RBP13.27□□□□□ -0.29
SCARF1-209ENST00000576012 HRH4Q9H3N8 390 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 APMAPQ9HDC9 416 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 MED9Q9NWA0 146 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 CES1P1Q9UKY3 287 aa13.27□□□□□ -0.29
SCARF1-209ENST00000576012 A0A0B4J2A0 478 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 A0A1B0GW55 424 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 HOXA2O43364 376 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 IL5P05113 134 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 F13BP05160 661 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 GP1BAP07359 652 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 DUX4L2P0CJ85 424 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 DUX4L3P0CJ86 424 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 DUX4L4P0CJ87 422 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 DUX4L5P0CJ88 424 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 DUX4L6P0CJ89 424 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 DUX4L7P0CJ90 424 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 ADRB3P13945 408 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 ST6GAL1P15907 406 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 DDX6P26196 483 aaKnown RBP eCLIP13.26□□□□□ -0.29
SCARF1-209ENST00000576012 ACTA2P62736 377 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 ACTG2P63267 376 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 GALNT16Q8N428 558 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 OR5AK2Q8NH90 309 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 CXorf40AQ8TE69 158 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 ZNF296Q8WUU4 475 aaPredicted RBP13.26□□□□□ -0.29
SCARF1-209ENST00000576012 PPP1R1CQ8WVI7 109 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 TMED6Q8WW62 240 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 ZNF681Q96N22 645 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 DUX4Q9UBX2 424 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 SHPKQ9UHJ6 478 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 TSPAN11A1L157 253 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 GLSO94925 669 aaPredicted RBP13.26□□□□□ -0.29
SCARF1-209ENST00000576012 HLA-AP01891 365 aaKnown RBP13.26□□□□□ -0.29
SCARF1-209ENST00000576012 EMDP50402 254 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 SNTB1Q13884 538 aaKnown RBP13.26□□□□□ -0.29
SCARF1-209ENST00000576012 LHX8Q68G74 356 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 STEAP1BQ6NZ63 245 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 TMPRSS9Q7Z410 1059 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 TMEM200AQ86VY9 491 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 ZNF784Q8NCA9 323 aaPredicted RBP13.26□□□□□ -0.29
SCARF1-209ENST00000576012 SFXN5Q8TD22 340 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 MIB2Q96AX9 1013 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 ZNF558Q96NG5 402 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 MYADMQ96S97 322 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 JAM3Q9BX67 310 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 COA4Q9NYJ1 87 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 TMEM82A0PJX8 343 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 TMEM218A2RU14 115 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 CPED1A4D0V7 1026 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 PRRT4C9JH25 899 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 TXNL1O43396 289 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 ACTL6AO96019 429 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 DCNP07585 359 aaKnown RBP13.26□□□□□ -0.29
SCARF1-209ENST00000576012 CCKBRP32239 447 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 MNDAP41218 407 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 POU3F4P49335 361 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 PRMT2P55345 433 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 PPIAP62937 165 aaKnown RBP13.26□□□□□ -0.29
SCARF1-209ENST00000576012 PRSS41Q7RTY9 318 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 SPAG16Q8N0X2 631 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 ZSCAN1Q8NBB4 408 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 OR5T3Q8NGG3 340 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 RXFP4Q8TDU9 374 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 PARP12Q9H0J9 701 aaKnown RBP13.26□□□□□ -0.29
SCARF1-209ENST00000576012 SLC25A32Q9H2D1 315 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 BIN3Q9NQY0 253 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 MBNL1Q9NR56 388 aaKnown RBP13.26□□□□□ -0.29
SCARF1-209ENST00000576012 STEAP1Q9UHE8 339 aa13.26□□□□□ -0.29
SCARF1-209ENST00000576012 RFPL4AA6NLU0 287 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 PRSS47A8MTI9 375 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 RFPL4AL1F8VTS6 287 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 RAB3DO95716 219 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 APOC1P02654 83 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 SPI1P17947 270 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms