RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 PPIAL4CA0A0B4J2A2 164 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 SLC22A23A1A5C7 686 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 PPIAL4DF5H284 164 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 TIMM23O14925 209 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 TRAF3IP2O43734 574 aaPredicted RBP13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 AKAP8O43823 692 aaKnown RBP13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 TRIM13O60858 407 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 PPIAL4FP0DN26 164 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 CCL2P13500 99 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 PRG2P13727 222 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 MAKP20794 623 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 MTNR1AP48039 350 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 ERVS71-1P61550 626 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 GLO1Q04760 184 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 CAMK2DQ13557 499 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 LRRC74BQ6ZQY2 392 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 RHOUQ7L0Q8 258 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 RNF130Q86XS8 419 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 VRK2Q86Y07 508 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 HOMEZQ8IX15 550 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 C20orf196Q8IYI0 205 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 ICA1LQ8NDH6 482 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 C11orf40Q8WZ69 217 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 RBM4BQ9BQ04 359 aaKnown RBP13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 SLC35A5Q9BS91 424 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 MRI1Q9BV20 369 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 PTDSS2Q9BVG9 487 aa13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 DENND2DQ9H6A0 471 aaPredicted RBP13.79□□□□□ -0.2
CTDNEP1-211ENST00000575783 ARHGAP32A7KAX9 2087 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 A0A096LPI6 279 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 A0A1B0GUS0 222 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 PRSS51A0A1B0GVH4 220 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 CDHR4A6H8M9 788 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 TRAPPC2LH3BP13 241 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 M0R082 166 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 COPEO14579 308 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 RIPK2O43353 540 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 UBL3O95164 117 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 SERPINA5P05154 406 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 NR2F1P10589 423 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 ZNF250P15622 560 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 DRD4P21917 467 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 RPS4Y1P22090 263 aaKnown RBP13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 CBLP22681 906 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 RBBP4Q09028 425 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 PCLAFQ15004 111 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 ZNF584Q8IVC4 421 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 PEX5LQ8IYB4 626 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 PAQR4Q8N4S7 273 aaPredicted RBP13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 ZNF417Q8TAU3 575 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 TRIM44Q96DX7 344 aaPredicted RBP13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 ELMOD3Q96FG2 381 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 ZNF587Q96SQ5 575 aaPredicted RBP13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 CITED1Q99966 193 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 B3GAT2Q9NPZ5 323 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 TNFRSF19Q9NS68 423 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 FBXL3Q9UKT7 428 aa13.78□□□□□ -0.2
CTDNEP1-211ENST00000575783 IGLV3-9A0A075B6K5 115 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 FAM181BA6NEQ2 426 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 AIM2O14862 343 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 MT-ND5P03915 603 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 CRYBA1P05813 215 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 OR8G3PP0DMU2 310 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 RAG2P55895 527 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 EGR4Q05215 589 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 CKAP4Q07065 602 aaKnown RBP13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 ANXA8L1Q5VT79 327 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 OLFML2AQ68BL7 652 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 SYT10Q6XYQ8 523 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 ZNF836Q6ZNA1 936 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 TRMT10CQ7L0Y3 403 aaKnown RBP13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 MIER2Q8N344 545 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 SLC30A7Q8NEW0 376 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 VPS37AQ8NEZ2 397 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 OR8J2Q8NGG1 315 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 OR52E2Q8NGJ4 325 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 OR6N1Q8NGY5 312 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 OR4F5Q8NH21 305 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 OR52P1PQ8NH57 321 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 FGFBP3Q8TAT2 258 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 ZNF519Q8TB69 540 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 FOXB1Q99853 325 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 ULBP2Q9BZM5 246 aa13.77□□□□□ -0.21
CTDNEP1-211ENST00000575783 MDFIC2A0A1B0GVS7 189 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 HOXA3O43365 443 aaPredicted RBP13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 SPRY3O43610 288 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 ZNF500O60304 480 aaPredicted RBP13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 SBK2P0C263 348 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 IGHV4-38-2P0DP08 117 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 HLA-DOBP13765 273 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 GRPRP30550 384 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 ZNF81P51508 661 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 EMX2Q04743 252 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 MOGQ16653 247 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 ZNF362Q5T0B9 420 aaPredicted RBP13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 H1FNTQ75WM6 255 aaPredicted RBP13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 ZNF627Q7L945 461 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 UEVLDQ8IX04 471 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 SKA3Q8IX90 412 aa13.76□□□□□ -0.21
CTDNEP1-211ENST00000575783 CLIP4Q8N3C7 705 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms