RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 UBE2TQ9NPD8 197 aaPredicted RBP4.23□□□□□ -1.73
TSR1-203ENST00000575049 PRSS16Q9NQE7 514 aa4.23□□□□□ -1.73
TSR1-203ENST00000575049 ZNF224Q9NZL3 707 aa4.23□□□□□ -1.73
TSR1-203ENST00000575049 MYEF2Q9P2K5 600 aaKnown RBP4.23□□□□□ -1.73
TSR1-203ENST00000575049 HMGXB4Q9UGU5 601 aa4.23□□□□□ -1.73
TSR1-203ENST00000575049 NUP50Q9UKX7 468 aa4.23□□□□□ -1.73
TSR1-203ENST00000575049 EXOSC1Q9Y3B2 195 aaKnown RBP4.23□□□□□ -1.73
TSR1-203ENST00000575049 AK6Q9Y3D8 172 aaKnown RBP4.23□□□□□ -1.73
TSR1-203ENST00000575049 MYH14Q7Z406 1995 aaKnown RBP4.23□□□□□ -1.73
TSR1-203ENST00000575049 CACNA1IQ9P0X4 2223 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 SHANK3Q9BYB0 1731 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 A0A0A6YYD4 124 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 C1orf232A0A0U1RR37 186 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 OR5H15A6NDH6 313 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 ARHGEF33A8MVX0 844 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 E7ESA3 106 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 H3BNX3 289 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 CYB561D2O14569 222 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 SIGLEC5O15389 551 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 GMDSO60547 372 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 TOM1O60784 492 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 FCN3O75636 299 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 ATP5LO75964 103 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 MYO1DO94832 1006 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 PROSCO94903 275 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 BRI3O95415 125 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 TOMM40O96008 361 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 CD48P09326 243 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 TRIM49P0CI25 452 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 TRIM49CP0CI26 452 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 FGF3P11487 239 aaPredicted RBP4.22□□□□□ -1.73
TSR1-203ENST00000575049 CD40LGP29965 261 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 GTF2H1P32780 548 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 PHBP35232 272 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 QARSP47897 775 aaKnown RBP4.22□□□□□ -1.73
TSR1-203ENST00000575049 GPX6P59796 221 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 HNRNPA0Q13151 305 aaKnown RBP4.22□□□□□ -1.73
TSR1-203ENST00000575049 PIGHQ14442 188 aaPredicted RBP4.22□□□□□ -1.73
TSR1-203ENST00000575049 SLC17A1Q14916 467 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 BCL2A1Q16548 175 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 ISXQ2M1V0 245 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 PRTGQ2VWP7 1150 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 FAM106AQ4KMX7 169 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 CYBRD1Q53TN4 286 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 C9orf135Q5VTT2 229 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 STUMQ69YW2 141 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 REEP3Q6NUK4 255 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 PPP1R2P3Q6NXS1 205 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 Q6ZSR3 168 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 PID1Q7Z2X4 250 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 NUDCD3Q8IVD9 361 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 ZBED8Q8IZ13 594 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 C4orf33Q8N1A6 199 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 PLPPR1Q8TBJ4 325 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 GPR151Q8TDV0 419 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 CA5BP1Q8WTZ4 195 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 DCAKDQ8WVC6 231 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 HTR3CQ8WXA8 447 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 CPB2Q96IY4 423 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 HSD17B14Q9BPX1 270 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 PAPOLGQ9BWT3 736 aaKnown RBP4.22□□□□□ -1.73
TSR1-203ENST00000575049 MRPS26Q9BYN8 205 aaKnown RBP4.22□□□□□ -1.73
TSR1-203ENST00000575049 ZNF696Q9H7X3 374 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 NANSQ9NR45 359 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 GPATCH2LQ9NWQ4 482 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 CLEC5AQ9NY25 188 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 EMC3Q9P0I2 261 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 RCOR3Q9P2K3 495 aaPredicted RBP4.22□□□□□ -1.73
TSR1-203ENST00000575049 COQ4Q9Y3A0 265 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 MYH3P11055 1940 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 LAMB2P55268 1798 aa4.22□□□□□ -1.73
TSR1-203ENST00000575049 CLUHO75153 1309 aa4.21□□□□□ -1.73
TSR1-203ENST00000575049 A0A0G2JND7 137 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 IQANK1A0A1B0GTG1 560 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 M0R3G1 203 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 ITGB1BP1O14713 200 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 ATP6V0E1O15342 81 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 HDAC3O15379 428 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 PPIHO43447 177 aaKnown RBP4.21□□□□□ -1.74
TSR1-203ENST00000575049 FAM189A1O60320 539 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 CTSVO60911 334 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 AP2A1O95782 977 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 TSPAN13O95857 204 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 IGHG4P01861 327 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 DCNP07585 359 aaKnown RBP4.21□□□□□ -1.74
TSR1-203ENST00000575049 SERPINA6P08185 405 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 MRPL19P49406 292 aaKnown RBP4.21□□□□□ -1.74
TSR1-203ENST00000575049 LBX1P52954 281 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 HERV-K104P61576 105 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 RPS6P62753 249 aaKnown RBP4.21□□□□□ -1.74
TSR1-203ENST00000575049 APOFQ13790 326 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 PTGR1Q14914 329 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 CYTH1Q15438 398 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 MAPRE2Q15555 327 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 TRIP13Q15645 432 aaPredicted RBP4.21□□□□□ -1.74
TSR1-203ENST00000575049 RFTN2Q52LD8 501 aaPredicted RBP4.21□□□□□ -1.74
TSR1-203ENST00000575049 ATP1A1-AS1Q5TC04 95 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 OGFRL1Q5TC84 451 aaPredicted RBP4.21□□□□□ -1.74
TSR1-203ENST00000575049 C1orf146Q5VVC0 180 aa4.21□□□□□ -1.74
TSR1-203ENST00000575049 GPR107Q5VW38 600 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms