RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 C17orf78Q8N4C9 275 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 WDR31Q8NA23 367 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 C1orf162Q8NEQ5 155 aaPredicted RBP6.51□□□□□ -1.37
NUP88-205ENST00000572809 OR6S1Q8NH40 331 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 SLC26A7Q8TE54 656 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 FAM168AQ92567 244 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 BOD1Q96IK1 185 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 Q96MF0 132 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 EPYCQ99645 322 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 MCHR1Q99705 422 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 SMR3AQ99954 134 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 SH3GL1Q99961 368 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 ECSITQ9BQ95 431 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 AMBRA1Q9C0C7 1298 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 SAR1AQ9NR31 198 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 SLC17A5Q9NRA2 495 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 FGFR1OP2Q9NVK5 253 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 FAIMQ9NVQ4 179 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 SEC14L4Q9UDX3 406 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 B3GALT5Q9Y2C3 310 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 AMDHD2Q9Y303 409 aa6.51□□□□□ -1.37
NUP88-205ENST00000572809 ROS1P08922 2347 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 IGKV1D-42A0A075B6H8 117 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 LOC102725191A0A1B0GVB3 256 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 E7EQL1 145 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 ZNF587BE7ETH6 402 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 MS4A18H0YCH9 400 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 FZD7O75084 574 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 UPK3AO75631 287 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 PAX7P23759 505 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 GRPRP30550 384 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 GZMMP51124 257 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 CDH12P55289 794 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 IL1RL1Q01638 556 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 LTBQ06643 244 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 MAPRE2Q15555 327 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 NRF1Q16656 503 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 VMACQ2NL98 169 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 PGGHGQ32M88 737 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 TRMT5Q32P41 509 aaKnown RBP6.5□□□□□ -1.37
NUP88-205ENST00000572809 MS4A18Q3C1V0 323 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 TMEM177Q53S58 311 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 RABL3Q5HYI8 236 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 COQ5Q5HYK3 327 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 ENTPD8Q5MY95 495 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 AGAP6Q5VW22 663 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 CGB2Q6NT52 195 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 ZNF613Q6PF04 617 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 CLEC9AQ6UXN8 241 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 CCDC80Q76M96 950 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 CIARTQ8N365 385 aaPredicted RBP6.5□□□□□ -1.37
NUP88-205ENST00000572809 C10orf53Q8N6V4 93 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 GPR32P1Q8NGA4 272 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 OR6T1Q8NGN1 323 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 RASSF5Q8WWW0 418 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 LRRC58Q96CX6 371 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 MAP6Q96JE9 813 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 KCNJ15Q99712 375 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 ARHGDIGQ99819 225 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 TMEM43Q9BTV4 400 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 LINC00470Q9BZP3 86 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 B3GAT1Q9P2W7 334 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 POU2F3Q9UKI9 436 aa6.5□□□□□ -1.37
NUP88-205ENST00000572809 MAGED1Q9Y5V3 778 aaPredicted RBP6.5□□□□□ -1.37
NUP88-205ENST00000572809 ACANP16112 2415 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 TRIM64A6NGJ6 449 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 TRIM64BA6NI03 449 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 CPSF4LA6NMK7 179 aaKnown RBP6.49□□□□□ -1.37
NUP88-205ENST00000572809 BBIP1A8MTZ0 92 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 FAM171A2A8MVW0 826 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 RPL36A-HNRNPH2H7BZ11 118 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 H7C1Q1 480 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 M0R3H8 397 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 MRASO14807 208 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 CHP2O43745 196 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 FMO6PO60774 539 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 SLC43A1O75387 559 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 ZNF432O94892 652 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 CD8AP01732 235 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 BGLAPP02818 100 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 NQO1P15559 274 aaKnown RBP6.49□□□□□ -1.37
NUP88-205ENST00000572809 PTNP21246 168 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 TTKP33981 857 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 PCGF2P35227 344 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 CDKN1AP38936 164 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 MDH1P40925 334 aaKnown RBP6.49□□□□□ -1.37
NUP88-205ENST00000572809 FABP6P51161 128 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 CDH11P55287 796 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 UBE2NP61088 152 aaKnown RBP6.49□□□□□ -1.37
NUP88-205ENST00000572809 SLC25A3Q00325 362 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 ROR2Q01974 943 aaKnown RBP6.49□□□□□ -1.37
NUP88-205ENST00000572809 LGALS3BPQ08380 585 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 PMS2P3Q13401 168 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 VEZF1Q14119 521 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 NPTX1Q15818 432 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 TBRG1Q3YBR2 411 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 HIKESHIQ53FT3 197 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 REP15Q6BDI9 236 aa6.49□□□□□ -1.37
NUP88-205ENST00000572809 HMBOX1Q6NT76 420 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms