RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 NUDCD3Q8IVD9 361 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 TMEM19Q96HH6 336 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 DUX5Q96PT3 197 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 C1QTNF5Q9BXJ0 243 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 ULBP2Q9BZM5 246 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 C20orf27Q9GZN8 174 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 B3GAT2Q9NPZ5 323 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 RPS6KB2Q9UBS0 482 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 WNK2Q9Y3S1 2297 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 C17orf100A8MU93 164 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 OR2T1O43869 369 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 PATE4P0C8F1 98 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 FAM157BP0CG42 384 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 NQO1P15559 274 aaKnown RBP16.93■□□□□ 0.3
CCDC40-206ENST00000572083 LSP1P33241 339 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 ETV4P43268 484 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 DSTNP60981 165 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 ABCE1P61221 599 aaKnown RBP16.93■□□□□ 0.3
CCDC40-206ENST00000572083 CAMK2DQ13557 499 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 RGS7BPQ6MZT1 257 aaPredicted RBP16.93■□□□□ 0.3
CCDC40-206ENST00000572083 ZNF627Q7L945 461 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 SLC38A4Q969I6 547 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 FOXB1Q99853 325 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 OR51B6Q9H340 312 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 ARMC7Q9H6L4 198 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 CACYBPQ9HB71 228 aaKnown RBP16.93■□□□□ 0.3
CCDC40-206ENST00000572083 OPN4Q9UHM6 478 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 LGALS13Q9UHV8 139 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 ZNF232Q9UNY5 417 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 RAP2CQ9Y3L5 183 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 WIPI2Q9Y4P8 454 aa16.93■□□□□ 0.3
CCDC40-206ENST00000572083 IGKV1D-42A0A075B6H8 117 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 MS4A18H0YCH9 400 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 RFXANKO14593 260 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 UBL3O95164 117 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 FSHBP01225 129 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 ERVS71-1P61550 626 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 MS4A18Q3C1V0 323 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 MIDNQ504T8 468 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 TMEM154Q6P9G4 183 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 C6orf89Q6UWU4 347 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 SIGLECL1Q8N7X8 197 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 ADPRHL1Q8NDY3 354 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 OR6N1Q8NGY5 312 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 FGFBP3Q8TAT2 258 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 SNX33Q8WV41 574 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 TXNDC15Q96J42 360 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 LRR1Q96L50 414 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 DENND2DQ9H6A0 471 aaPredicted RBP16.92■□□□□ 0.3
CCDC40-206ENST00000572083 C7orf69Q9H7B7 122 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 NTN4Q9HB63 628 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 HINT3Q9NQE9 182 aaKnown RBP16.92■□□□□ 0.3
CCDC40-206ENST00000572083 KLHL14Q9P2G3 628 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 CACNG2Q9Y698 323 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 VWFP04275 2813 aa16.92■□□□□ 0.3
CCDC40-206ENST00000572083 TRAV36DV7A0A075B6V5 113 aa16.91■□□□□ 0.3
CCDC40-206ENST00000572083 IGHV1-69-2A0A0G2JMI3 117 aa16.91■□□□□ 0.3
CCDC40-206ENST00000572083 LOC102725191A0A1B0GVB3 256 aa16.91■□□□□ 0.3
CCDC40-206ENST00000572083 TYROBPO43914 113 aa16.91■□□□□ 0.3
CCDC40-206ENST00000572083 SERPINI2O75830 405 aa16.91■□□□□ 0.3
CCDC40-206ENST00000572083 SERPINE1P05121 402 aa16.91■□□□□ 0.3
CCDC40-206ENST00000572083 FPR2P25090 351 aa16.91■□□□□ 0.3
CCDC40-206ENST00000572083 RAD52P43351 418 aa16.91■□□□□ 0.3
CCDC40-206ENST00000572083 RPL14P50914 215 aaKnown RBP16.91■□□□□ 0.3
CCDC40-206ENST00000572083 KLF3P57682 345 aaPredicted RBP16.91■□□□□ 0.3
CCDC40-206ENST00000572083 LRRC74AQ0VAA2 488 aa16.91■□□□□ 0.3
CCDC40-206ENST00000572083 PAQR4Q8N4S7 273 aaPredicted RBP16.91■□□□□ 0.3
CCDC40-206ENST00000572083 EIF1ADQ8N9N8 165 aaKnown RBP16.91■□□□□ 0.3
CCDC40-206ENST00000572083 GTF3AQ92664 365 aaKnown RBP16.91■□□□□ 0.3
CCDC40-206ENST00000572083 SORT1Q99523 831 aa16.91■□□□□ 0.3
CCDC40-206ENST00000572083 AIG1Q9NVV5 245 aa16.91■□□□□ 0.3
CCDC40-206ENST00000572083 IFT52Q9Y366 437 aa16.91■□□□□ 0.3
CCDC40-206ENST00000572083 A0A087WUJ7 227 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 A0A0G2JPF8 293 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 A0A1B0GWA3 101 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 HNRNPCL2B2RXH8 293 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 HNRNPCL3B7ZW38 293 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 CLDN25C9JDP6 229 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 TPD52L2O43399 206 aaKnown RBP16.9■□□□□ 0.3
CCDC40-206ENST00000572083 HNRNPCL1O60812 293 aaKnown RBP16.9■□□□□ 0.3
CCDC40-206ENST00000572083 HNRNPCL4P0DMR1 293 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 CCL2P13500 99 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 HTR2AP28223 471 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 CRYBB2P43320 205 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 PCGF3Q3KNV8 242 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 GTDC1Q4AE62 458 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 C5orf46Q6UWT4 87 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 USP51Q70EK9 711 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 MIER2Q8N344 545 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 DVL3Q92997 716 aaPredicted RBP16.9■□□□□ 0.3
CCDC40-206ENST00000572083 VPS33AQ96AX1 596 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 UNKLQ9H9P5 680 aaKnown RBP16.9■□□□□ 0.3
CCDC40-206ENST00000572083 MEAF6Q9HAF1 191 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 C12orf10Q9HB07 376 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 FBXL3Q9UKT7 428 aa16.9■□□□□ 0.3
CCDC40-206ENST00000572083 IGLV3-9A0A075B6K5 115 aa16.89■□□□□ 0.29
CCDC40-206ENST00000572083 ZNF500O60304 480 aaPredicted RBP16.89■□□□□ 0.29
CCDC40-206ENST00000572083 SERPINA5P05154 406 aa16.89■□□□□ 0.29
CCDC40-206ENST00000572083 SELENOVP59797 346 aa16.89■□□□□ 0.29
CCDC40-206ENST00000572083 LCN2P80188 198 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms