RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 UQCRBP14927 111 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 B4GALT1P15291 398 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 LSP1P33241 339 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 ACAA2P42765 397 aaKnown RBP8.79□□□□□ -1
CTDNEP1-202ENST00000570380 PROK1P58294 105 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 DNAJB13P59910 316 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 GLO1Q04760 184 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 SPRNQ5BIV9 151 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 SAMD5Q5TGI4 173 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 CARD17Q5XLA6 110 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 KANK2Q63ZY3 851 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 ZCCHC23Q6ZST2 131 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 REC114Q7Z4M0 266 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 HOMEZQ8IX15 550 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 C20orf196Q8IYI0 205 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 CADM2Q8N3J6 435 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 ANKFN1Q8N957 763 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 MFSD8Q8NHS3 518 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 LINC01006Q8NI28 216 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 ZNF519Q8TB69 540 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 MRAPQ8TCY5 172 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 ZDHHC16Q969W1 377 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 C1orf50Q9BV19 199 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 PTDSS2Q9BVG9 487 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 GATA5Q9BWX5 397 aaPredicted RBP8.79□□□□□ -1
CTDNEP1-202ENST00000570380 SLC38A1Q9H2H9 487 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 DENND2DQ9H6A0 471 aaPredicted RBP8.79□□□□□ -1
CTDNEP1-202ENST00000570380 MARCH7Q9H992 704 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 TCF7L1Q9HCS4 588 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 SLC6A13Q9NSD5 602 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 DCAF16Q9NXF7 216 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 ASH2LQ9UBL3 628 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 EGFL7Q9UHF1 273 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 TENM3Q9P273 2699 aa8.79□□□□□ -1
CTDNEP1-202ENST00000570380 A8MXK9 166 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 TMEM233B4DJY2 109 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 TM9SF1O15321 606 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 PEX11AO75192 247 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 UBL3O95164 117 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 AHSA1O95433 338 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 IGHV1-46P01743 117 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 IGHV2-70P01814 119 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 C1QCP02747 245 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 PROCP04070 461 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 LCKP06239 509 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 SBK2P0C263 348 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 PPIAL4GP0DN37 164 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 CCL2P13500 99 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 RPS4Y1P22090 263 aaKnown RBP8.78□□□□□ -1
CTDNEP1-202ENST00000570380 MAPK1P28482 360 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 RPS5P46782 204 aaKnown RBP8.78□□□□□ -1
CTDNEP1-202ENST00000570380 ZNF81P51508 661 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 LOXL3P58215 753 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 EGR4Q05215 589 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 SLC3A1Q07837 685 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 RBBP4Q09028 425 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 C1DQ13901 141 aaKnown RBP8.78□□□□□ -1
CTDNEP1-202ENST00000570380 PDCD1Q15116 288 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 SYPL1Q16563 259 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 PGS1Q32NB8 556 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 UGT3A2Q3SY77 523 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 FAM209AQ5JX71 171 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 IL23RQ5VWK5 629 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 WBP2NLQ6ICG8 309 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 OR4F3Q6IEY1 312 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 RNF130Q86XS8 419 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 SKA3Q8IX90 412 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 DDIASQ8IXT1 998 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 STK35Q8TDR2 534 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 C11orf40Q8WZ69 217 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 UPRTQ96BW1 309 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 DCLRE1CQ96SD1 692 aaKnown RBP8.78□□□□□ -1
CTDNEP1-202ENST00000570380 SLC30A2Q9BRI3 323 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 EMC6Q9BV81 110 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 PATZ1Q9HBE1 687 aaKnown RBP8.78□□□□□ -1
CTDNEP1-202ENST00000570380 RLIMQ9NVW2 624 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 DCDC2Q9UHG0 476 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 POFUT2Q9Y2G5 429 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 NPTNQ9Y639 398 aa8.78□□□□□ -1
CTDNEP1-202ENST00000570380 NOTCH3Q9UM47 2321 aa8.77□□□□□ -1
CTDNEP1-202ENST00000570380 DNAH9Q9NYC9 4486 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 A0A087WUV0 522 aaPredicted RBP8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 TRAV40A0A0B4J280 105 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 EXOC1LA0A1B0GW35 172 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 C5orf63A6NC05 138 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 HMGN4O00479 90 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 SPRY3O43610 288 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 FZD7O75084 574 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 CHEK2O96017 543 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 IGHV3-13P01766 116 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 IL7RP16871 459 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 PRPS1L1P21108 318 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 HPCAP84074 193 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 PAX2Q02962 417 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 CAMK2DQ13557 499 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 C2orf68Q2NKX9 166 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 TMEM255AQ5JRV8 349 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 FAM205BPQ63HN1 556 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 ATG16L1Q676U5 607 aa8.77□□□□□ -1.01
CTDNEP1-202ENST00000570380 BRD3OSQ6XYD6 125 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms