RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SERPINA7P05543 415 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 FCGR2AP12318 317 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 FMO4P31512 558 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 FMO3P31513 532 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 APOBEC3AP31941 199 aaPredicted RBP6.07□□□□□ -1.44
SMG1-217ENST00000569764 HNF4GQ14541 408 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 C5orf47Q569G3 176 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 ZNF549Q6P9A3 640 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 PRSS57Q6UWY2 283 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 CLNKQ7Z7G1 428 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 ATP6V1C2Q8NEY4 427 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 FAM110DQ8TAY7 271 aaPredicted RBP6.07□□□□□ -1.44
SMG1-217ENST00000569764 KCNA7Q96RP8 456 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 LYSMD1Q96S90 227 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 KAT8Q9H7Z6 458 aaKnown RBP6.07□□□□□ -1.44
SMG1-217ENST00000569764 MTHFD2LQ9H903 347 aaPredicted RBP6.07□□□□□ -1.44
SMG1-217ENST00000569764 TCAF1Q9Y4C2 921 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 PIKFYVEQ9Y2I7 2098 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 A0A096LPE4 126 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 LOC285095A0A1B0GVY8 99 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 A0A1W2PPZ6 126 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 MROH6A6NGR9 719 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 C5orf58C9J3I9 102 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 CDX4O14627 284 aaPredicted RBP6.07□□□□□ -1.44
SMG1-217ENST00000569764 GOSR2O14653 212 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 TRIM24O15164 1050 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 XRCC2O43543 280 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 OR1F1O43749 312 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 SSNA1O43805 119 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 CDC40O60508 579 aaKnown RBP eCLIP6.07□□□□□ -1.44
SMG1-217ENST00000569764 MYL2P10916 166 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 MST1P26927 711 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 PRDX2P32119 198 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 MAS1LP35410 378 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 CDKN2DP55273 166 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 TNFRSF9Q07011 255 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 OR4D1Q15615 310 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 COX19Q49B96 90 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 OR2B11Q5JQS5 317 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 ACSM5Q6NUN0 579 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 ZNF562Q6V9R5 426 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 ENTHD1Q8IYW4 607 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 EIF4E3Q8N5X7 224 aaKnown RBP6.07□□□□□ -1.44
SMG1-217ENST00000569764 SDR9C7Q8NEX9 313 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 SEMA6DQ8NFY4 1073 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 OR10K1Q8NGX5 313 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 SCAMP4Q969E2 229 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 C3orf30Q96M34 536 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 TRIB1Q96RU8 372 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 PLEKHA1Q9HB21 404 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 ZNF226Q9NYT6 803 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 RSL24D1Q9UHA3 163 aaKnown RBP6.07□□□□□ -1.44
SMG1-217ENST00000569764 CELSR3Q9NYQ7 3312 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 ZNF318Q5VUA4 2279 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 A0A096LPK6 155 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 OR2J3O76001 311 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 GLCEO94923 617 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 FBP1P09467 338 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 SAGP10523 405 aaPredicted RBP6.06□□□□□ -1.44
SMG1-217ENST00000569764 LYL1P12980 280 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 RPL10P27635 214 aaKnown RBP6.06□□□□□ -1.44
SMG1-217ENST00000569764 UQCRC1P31930 480 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 KHKP50053 298 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 CNN1P51911 297 aaKnown RBP6.06□□□□□ -1.44
SMG1-217ENST00000569764 TAS2R39P59534 338 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 RBX1P62877 108 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 TXNL4AP83876 142 aaKnown RBP6.06□□□□□ -1.44
SMG1-217ENST00000569764 AESQ08117 197 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 ACSM2AQ08AH3 577 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 PRICKLE4Q2TBC4 344 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 ZFP69Q49AA0 526 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 ZNF766Q5HY98 468 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 ACSM2BQ68CK6 577 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 REP15Q6BDI9 236 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 OGFOD2Q6N063 350 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 LPCAT3Q6P1A2 487 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 RRM2BQ7LG56 351 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 CRLF3Q8IUI8 442 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 OR6X1Q8NH79 312 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 FAM222BQ8WU58 562 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 OR14A2Q96R54 314 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 LYRM4Q9HD34 91 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 BIN3Q9NQY0 253 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 LHX3Q9UBR4 397 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 ZNF221Q9UK13 617 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 MRPS18BQ9Y676 258 aaKnown RBP6.06□□□□□ -1.44
SMG1-217ENST00000569764 PLXNB3Q9ULL4 1909 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 LOC102724200A0A096LPH7 203 aaPredicted RBP6.06□□□□□ -1.44
SMG1-217ENST00000569764 CDC7O00311 574 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 AZIN1O14977 448 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 SURF4O15260 269 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 DEAF1O75398 565 aaPredicted RBP6.06□□□□□ -1.44
SMG1-217ENST00000569764 TRAPPC6AO75865 159 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 NUDT14O95848 222 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 THBDP07204 575 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 INHBBP09529 407 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 LINC00614P0C842 121 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 ANXA3P12429 323 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 CR2P20023 1033 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 CD247P20963 164 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms