RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 ASAH2BP0C7U1 165 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 AHCYP23526 432 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 FPR3P25089 353 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 PEX2P28328 305 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 AQP2P41181 271 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 GSSP48637 474 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 DAPP51397 102 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 AGFG1P52594 562 aaKnown RBP6.89□□□□□ -1.31
SMG1-214ENST00000568038 TLE1Q04724 770 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 TSPAN31Q12999 210 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 MRPL49Q13405 166 aaKnown RBP6.89□□□□□ -1.31
SMG1-214ENST00000568038 IGFBP7Q16270 282 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 ZNF239Q16600 458 aaKnown RBP6.89□□□□□ -1.31
SMG1-214ENST00000568038 ZBED5Q49AG3 693 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 TMEM225Q6GV28 225 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 H1FNTQ75WM6 255 aaPredicted RBP6.89□□□□□ -1.31
SMG1-214ENST00000568038 FCRLAQ7L513 359 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 P4HA3Q7Z4N8 544 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 NANOGNBQ7Z5D8 188 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 GALNT5Q7Z7M9 940 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 JAZF1Q86VZ6 243 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 KDM8Q8N371 416 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 ZNF843Q8N446 348 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 GALNT4Q8N4A0 578 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 CBR4Q8N4T8 237 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 ST6GALNAC3Q8NDV1 305 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 MOSPD2Q8NHP6 518 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 FNDC9Q8TBE3 224 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 MAGEE2Q8TD90 523 aaPredicted RBP6.89□□□□□ -1.31
SMG1-214ENST00000568038 CPNE4Q96A23 557 aaPredicted RBP6.89□□□□□ -1.31
SMG1-214ENST00000568038 TNFRSF13CQ96RJ3 184 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 SLC29A1Q99808 456 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 PSD2Q9BQI7 771 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 NAA11Q9BSU3 229 aaPredicted RBP6.89□□□□□ -1.31
SMG1-214ENST00000568038 C9orf16Q9BUW7 83 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 OSBPL10Q9BXB5 764 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 DGCR6LQ9BY27 220 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 UCK2Q9BZX2 261 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 TMPRSS5Q9H3S3 457 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 ZNF556Q9HAH1 456 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 CHST11Q9NPF2 352 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 PAQR5Q9NXK6 330 aaPredicted RBP6.89□□□□□ -1.31
SMG1-214ENST00000568038 KLHL13Q9P2N7 655 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 ASH2LQ9UBL3 628 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 TINAGQ9UJW2 476 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 ZNF229Q9UJW7 825 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 MCTS1Q9ULC4 181 aaKnown RBP6.89□□□□□ -1.31
SMG1-214ENST00000568038 ZNF835Q9Y2P0 537 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 ZGRF1Q86YA3 2104 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 CFAP47Q6ZTR5 3102 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 TRGV8A0A0C4DH27 118 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 SLC22A20A6NK97 555 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 AQP7P3A6NL99 342 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 MS4A18H0YCH9 400 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 PLPP3O14495 311 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 CASQ2O14958 399 aaPredicted RBP6.88□□□□□ -1.31
SMG1-214ENST00000568038 RNF13O43567 381 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 WDR1O75083 606 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 PTP4A3O75365 173 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 C1QL1O75973 258 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 OR6A2O95222 327 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 TGM6O95932 706 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 HPRP00739 348 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 IGFBP1P08833 259 aaPredicted RBP6.88□□□□□ -1.31
SMG1-214ENST00000568038 ADORA3P0DMS8 318 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 GABRA1P14867 456 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 GSTM3P21266 225 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 IGFBP5P24593 272 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 ACVR2AP27037 513 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 POU1F1P28069 291 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 SLC9A3P48764 834 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 RPL18Q07020 188 aaKnown RBP6.88□□□□□ -1.31
SMG1-214ENST00000568038 DAG1Q14118 895 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 SF3B4Q15427 424 aaKnown RBP eCLIP6.88□□□□□ -1.319e-6■■■■□ 20
SMG1-214ENST00000568038 MS4A18Q3C1V0 323 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 ACSF3Q4G176 576 aaPredicted RBP6.88□□□□□ -1.31
SMG1-214ENST00000568038 C1orf185Q5T7R7 199 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 OGFRL1Q5TC84 451 aaPredicted RBP6.88□□□□□ -1.31
SMG1-214ENST00000568038 KDM4DQ6B0I6 523 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 FAHD1Q6P587 224 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 PAQR6Q6TCH4 344 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 KLHL17Q6TDP4 642 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 RASSF6Q6ZTQ3 369 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 GPAT4Q86UL3 456 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 IGFN1Q86VF2 1251 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 KIF18BQ86Y91 864 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 DOLPP1Q86YN1 238 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 MCEMP1Q8IX19 187 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 RPRMLQ8N4K4 120 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 FANK1Q8TC84 345 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 ZPLD1Q8TCW7 415 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 ABHD3Q8WU67 409 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 NRG4Q8WWG1 115 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 LIPHQ8WWY8 451 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 RBM4BQ9BQ04 359 aaKnown RBP6.88□□□□□ -1.31
SMG1-214ENST00000568038 RBM4Q9BWF3 364 aaKnown RBP6.88□□□□□ -1.31
SMG1-214ENST00000568038 GABARAPL1Q9H0R8 117 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 CDIP1Q9H305 208 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 EGLN3Q9H6Z9 239 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 MCCC2Q9HCC0 563 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms