RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SLC7A7Q9UM01 511 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 MOKQ9UQ07 419 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 NOX1Q9Y5S8 564 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 ATP23Q9Y6H3 246 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 PMF1-BGLAPU3KQ54 211 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 SLC35F4A4IF30 521 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 ZNF726A6NNF4 738 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 INAFM1C9JVW0 142 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 LRRN3E7EW58 273 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 M0R3G1 203 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 SLC22A2O15244 555 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 RNF13O43567 381 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 SSX4O60224 188 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 PDE5AO76074 875 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 OR6A2O95222 327 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 LYPD3O95274 346 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 CH25HO95992 272 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 HPRP00739 348 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 IGF2P01344 180 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 IFNA14P01570 189 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 THY1P04216 161 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 TP53P04637 393 aaPredicted RBP4.16□□□□□ -1.74
CLK3-219ENST00000567805 HIST1H2ABP04908 130 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 CSF3P09919 207 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 ASAH2BP0C7U1 165 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 CECR9P0C854 216 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 ADORA3P0DMS8 318 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 HLA-DOBP13765 273 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 CBR1P16152 277 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 PTNP21246 168 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 AHCYP23526 432 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 VAMP1P23763 118 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 PCSK6P29122 969 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 ARR3P36575 388 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 RBM34P42696 430 aaKnown RBP4.16□□□□□ -1.74
CLK3-219ENST00000567805 EFNA4P52798 201 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 CRYBA2P53672 197 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 SNRPD2P62316 118 aaKnown RBP4.16□□□□□ -1.74
CLK3-219ENST00000567805 TUBA1BP68363 451 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 TUBA4AP68366 448 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 ARF1P84077 181 aaKnown RBP4.16□□□□□ -1.74
CLK3-219ENST00000567805 NAAAQ02083 359 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 GUCY1A3Q02108 690 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 KRTAP1-1Q07627 177 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 ZP4Q12836 540 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 CAMK2DQ13557 499 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 ZNF74Q16587 644 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 HSP90B2PQ58FF3 399 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 RABL3Q5HYI8 236 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 PHYHD1Q5SRE7 291 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 CARD17Q5XLA6 110 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 CGB2Q6NT52 195 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 NHLRC1Q6VVB1 395 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 WDR88Q6ZMY6 472 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 TUBA1AQ71U36 451 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 HIST3H2AQ7L7L0 130 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 ZNF627Q7L945 461 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 TSPYL5Q86VY4 417 aaPredicted RBP4.16□□□□□ -1.74
CLK3-219ENST00000567805 RBM45Q8IUH3 476 aaKnown RBP4.16□□□□□ -1.74
CLK3-219ENST00000567805 MAPK1IP1LQ8NDC0 245 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 NUP37Q8NFH4 326 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 OR10H5Q8NGA6 315 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 OR4D11Q8NGI4 311 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 OR6X1Q8NH79 312 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 NANOS1Q8WY41 292 aaKnown RBP4.16□□□□□ -1.74
CLK3-219ENST00000567805 PROX1Q92786 737 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 HIST1H2ACQ93077 130 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 FBXO17Q96EF6 278 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 ZNF837Q96EG3 531 aaPredicted RBP4.16□□□□□ -1.74
CLK3-219ENST00000567805 ZNF583Q96ND8 569 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 EMC6Q9BV81 110 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 KRTAP9-2Q9BYQ4 174 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 ULBP2Q9BZM5 246 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 DENND2DQ9H6A0 471 aaPredicted RBP4.16□□□□□ -1.74
CLK3-219ENST00000567805 MED4Q9NPJ6 270 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 ZNF446Q9NWS9 450 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 MED29Q9NX70 200 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 TAS2R5Q9NYW4 299 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 ZNF229Q9UJW7 825 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 BAG5Q9UL15 447 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 USP22Q9UPT9 525 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 AP3M1Q9Y2T2 418 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 SH3GLB1Q9Y371 365 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 FKBP7Q9Y680 259 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 CAPN7Q9Y6W3 813 aa4.16□□□□□ -1.74
CLK3-219ENST00000567805 IGHV4-30-2A0A087WSY4 118 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 IGHV2OR16-5A0A0B4J2B6 119 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 LOC100653049A0A140TA62 436 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 ELOVL7A1L3X0 281 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 ZNF503-AS2A6NEH8 195 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 A6NJY4 79 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 VSTM5A8MXK1 200 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 FAM220BPB1ANY3 271 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 B9A039 149 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 C11orf98E9PRG8 122 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 NDUFS8O00217 210 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 KPNA4O00629 521 aaPredicted RBP4.15□□□□□ -1.75
CLK3-219ENST00000567805 TLX2O43763 284 aaPredicted RBP4.15□□□□□ -1.75
CLK3-219ENST00000567805 CD5LO43866 347 aa4.15□□□□□ -1.75
CLK3-219ENST00000567805 ENTPD5O75356 428 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms