RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 TSPEARQ8WU66 669 aa13.03□□□□□ -0.32
SCAMP2-209ENST00000567638 FOXN4Q96NZ1 517 aa13.03□□□□□ -0.32
SCAMP2-209ENST00000567638 ULBP2Q9BZM5 246 aa13.03□□□□□ -0.32
SCAMP2-209ENST00000567638 RAB1BQ9H0U4 201 aa13.03□□□□□ -0.32
SCAMP2-209ENST00000567638 NOX3Q9HBY0 568 aa13.03□□□□□ -0.32
SCAMP2-209ENST00000567638 B3GNT2Q9NY97 397 aa13.03□□□□□ -0.32
SCAMP2-209ENST00000567638 LPAR3Q9UBY5 353 aa13.03□□□□□ -0.32
SCAMP2-209ENST00000567638 TRIM33Q9UPN9 1127 aa13.03□□□□□ -0.32
SCAMP2-209ENST00000567638 FBN1P35555 2871 aaKnown RBP13.03□□□□□ -0.32
SCAMP2-209ENST00000567638 CUBNO60494 3623 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 CPSF4LA6NMK7 179 aaKnown RBP13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 ZNF726A6NNF4 738 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 M0QX08 132 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 SERPINI2O75830 405 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 B4GALT1P15291 398 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 AHCYP23526 432 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 SNTB2Q13425 540 aaKnown RBP13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 CAMK2DQ13557 499 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 NFYCQ13952 458 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 DAG1Q14118 895 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 GSG1Q2KHT4 349 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 ENTPD8Q5MY95 495 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 WDR88Q6ZMY6 472 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 ZNF813Q6ZN06 617 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 SPATA21Q7Z572 469 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 SNX32Q86XE0 403 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 SLC30A8Q8IWU4 369 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 ZNF75AQ96N20 296 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 DOK1Q99704 481 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 BEX2Q9BXY8 128 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 KAT8Q9H7Z6 458 aaKnown RBP13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 NPHS2Q9NP85 383 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 POFUT2Q9Y2G5 429 aa13.02□□□□□ -0.33
SCAMP2-209ENST00000567638 IGHV4-61A0A0C4DH41 118 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 TMEM129A0AVI4 362 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 RNF212BA8MTL3 300 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 C11orf98E9PRG8 122 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 LMX1BO60663 402 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 EDF1O60869 148 aaKnown RBP13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 LYPD3O95274 346 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 ERCC1P07992 297 aaPredicted RBP13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 ADORA3P0DMS8 318 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 CD79AP11912 226 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 APEHP13798 732 aaKnown RBP13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 ZNF14P17017 642 aaPredicted RBP13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 CD247P20963 164 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 PCGF2P35227 344 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 KRT80Q6KB66 452 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 PATL1Q86TB9 770 aaKnown RBP13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 OR4D11Q8NGI4 311 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 VANGL1Q8TAA9 524 aaPredicted RBP13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 ADAMTS16Q8TE57 1224 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 NEU4Q8WWR8 484 aaPredicted RBP13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 MS4A3Q96HJ5 214 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 FOXB1Q99853 325 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 SIKE1Q9BRV8 207 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 BPESC1Q9GZL8 116 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 SHARPINQ9H0F6 387 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 DYNLRB1Q9NP97 96 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 ZNF224Q9NZL3 707 aa13.01□□□□□ -0.33
SCAMP2-209ENST00000567638 MXRA5Q9NR99 2828 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 OR6A2O95222 327 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 STAMBPO95630 424 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 THY1P04216 161 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 DAOP14920 347 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 IFNGR1P15260 489 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 ZNF23P17027 643 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 NR4A1P22736 598 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 IGFBP5P24593 272 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 CSNK1A1P48729 337 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 BIDP55957 195 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 PIGFQ07326 219 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 ZNF74Q16587 644 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 IQCCQ4KMZ1 466 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 INTS11Q5TA45 600 aaKnown RBP13□□□□□ -0.33
SCAMP2-209ENST00000567638 FAM166AQ6J272 317 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 TTC33Q6PID6 262 aaPredicted RBP13□□□□□ -0.33
SCAMP2-209ENST00000567638 SLC35D2Q76EJ3 337 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 HDXQ7Z353 690 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 TSPYL5Q86VY4 417 aaPredicted RBP13□□□□□ -0.33
SCAMP2-209ENST00000567638 RBM45Q8IUH3 476 aaKnown RBP13□□□□□ -0.33
SCAMP2-209ENST00000567638 CDK20Q8IZL9 346 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 ZCCHC24Q8N2G6 241 aaKnown RBP13□□□□□ -0.33
SCAMP2-209ENST00000567638 ARIH2OSQ8N7S6 290 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 ZNF540Q8NDQ6 660 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 OR10A6Q8NH74 314 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 TAMM41Q96BW9 452 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 MSI2Q96DH6 328 aaKnown RBP13□□□□□ -0.33
SCAMP2-209ENST00000567638 PCDHAC1Q9H158 963 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 DENND2DQ9H6A0 471 aaPredicted RBP13□□□□□ -0.33
SCAMP2-209ENST00000567638 VIPAS39Q9H9C1 493 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 KCNS2Q9ULS6 477 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 SLC7A7Q9UM01 511 aa13□□□□□ -0.33
SCAMP2-209ENST00000567638 A0A0G2JND7 137 aa12.99□□□□□ -0.33
SCAMP2-209ENST00000567638 LOC100289279A0A1B0GTE1 492 aa12.99□□□□□ -0.33
SCAMP2-209ENST00000567638 SH3PXD2BA1X283 911 aa12.99□□□□□ -0.33
SCAMP2-209ENST00000567638 TRAPPC13A5PLN9 417 aa12.99□□□□□ -0.33
SCAMP2-209ENST00000567638 KPNA4O00629 521 aaPredicted RBP12.99□□□□□ -0.33
SCAMP2-209ENST00000567638 PHF1O43189 567 aaPredicted RBP12.99□□□□□ -0.33
SCAMP2-209ENST00000567638 UBL3O95164 117 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms