RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 GTPBP3Q969Y2 492 aaKnown RBP11.91□□□□□ -0.5
CLK3-218ENST00000566926 HRASLS5Q96KN8 279 aa11.91□□□□□ -0.5
CLK3-218ENST00000566926 WFIKKN1Q96NZ8 548 aa11.91□□□□□ -0.5
CLK3-218ENST00000566926 MBOAT4Q96T53 435 aa11.91□□□□□ -0.5
CLK3-218ENST00000566926 PITX2Q99697 317 aa11.91□□□□□ -0.5
CLK3-218ENST00000566926 NIPSNAP1Q9BPW8 284 aa11.91□□□□□ -0.5
CLK3-218ENST00000566926 PRRG3Q9BZD7 231 aa11.91□□□□□ -0.5
CLK3-218ENST00000566926 PDZD2O15018 2839 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 KLF4O43474 513 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 MPZL2O60487 215 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 CNOT4O95628 575 aaKnown RBP11.9□□□□□ -0.5
CLK3-218ENST00000566926 PSMB1P20618 241 aaKnown RBP11.9□□□□□ -0.5
CLK3-218ENST00000566926 OR3A2P47893 321 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 SLC9A3P48764 834 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 SLC16A1P53985 500 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 H3F3AP84243 136 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 P2RY6Q15077 328 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 ANKDD1AQ495B1 522 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 PRR14LQ5THK1 2151 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 PAQR6Q6TCH4 344 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 KLHL17Q6TDP4 642 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 STAC2Q6ZMT1 411 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 RASSF6Q6ZTQ3 369 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 ZNF100Q8IYN0 542 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 BPIFA2Q96DR5 249 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 CNBD2Q96M20 576 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 NDEL1Q9GZM8 345 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 PARPBPQ9NWS1 579 aa11.9□□□□□ -0.5
CLK3-218ENST00000566926 ING1Q9UK53 422 aaPredicted RBP11.9□□□□□ -0.5
CLK3-218ENST00000566926 NDRG4Q9ULP0 352 aaKnown RBP11.9□□□□□ -0.5
CLK3-218ENST00000566926 NOSIPQ9Y314 301 aaKnown RBP11.9□□□□□ -0.5
CLK3-218ENST00000566926 HEATR1Q9H583 2144 aaKnown RBP11.9□□□□□ -0.5
CLK3-218ENST00000566926 ZC3H12DA2A288 527 aaKnown RBP11.89□□□□□ -0.51
CLK3-218ENST00000566926 E9PQ18 207 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 OR2T1O43869 369 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 MITFO75030 526 aaPredicted RBP11.89□□□□□ -0.51
CLK3-218ENST00000566926 VAMP5O95183 116 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 AHSA1O95433 338 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 IMPDH2P12268 514 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 IFI30P13284 250 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 CRYGSP22914 178 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 IL32P24001 234 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 CRISP1P54107 249 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 CDC42P60953 191 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 TEKQ02763 1124 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 ZIK1Q3SY52 487 aaPredicted RBP11.89□□□□□ -0.51
CLK3-218ENST00000566926 ZNF691Q5VV52 312 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 C1orf140Q5VVS0 124 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 WDR88Q6ZMY6 472 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 Q6ZT83 130 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 THAP5Q7Z6K1 395 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 CDC20BQ86Y33 519 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 GABRG1Q8N1C3 465 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 OR6S1Q8NH40 331 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 TEX47Q8TBZ9 253 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 NINJ1Q92982 152 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 DNAJA3Q96EY1 480 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 FAM46AQ96IP4 442 aaKnown RBP11.89□□□□□ -0.51
CLK3-218ENST00000566926 SF3B5Q9BWJ5 86 aaKnown RBP11.89□□□□□ -0.51
CLK3-218ENST00000566926 GMPPBQ9Y5P6 360 aa11.89□□□□□ -0.51
CLK3-218ENST00000566926 DSCAMO60469 2012 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 LIPT2A6NK58 231 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 ZNF716A6NP11 495 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 EFCAB9A8MZ26 197 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 H3BN98 237 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 MRPL33O75394 65 aaKnown RBP11.88□□□□□ -0.51
CLK3-218ENST00000566926 HRGP04196 525 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 SAGP10523 405 aaPredicted RBP11.88□□□□□ -0.51
CLK3-218ENST00000566926 FUT4P22083 530 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 GTF2E2P29084 291 aaKnown RBP11.88□□□□□ -0.51
CLK3-218ENST00000566926 CCKARP32238 428 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 CHN2P52757 468 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 ITGADQ13349 1161 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 MFSD13AQ14CX5 517 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 OR7A5Q15622 319 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 SFRP5Q5T4F7 317 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 ANKRD34AQ69YU3 496 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 TMEM225Q6GV28 225 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 SSX8Q7RTT4 187 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 CXorf67Q86X51 503 aaPredicted RBP11.88□□□□□ -0.51
CLK3-218ENST00000566926 CCDC103Q8IW40 242 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 OR52L1Q8NGH7 329 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 MFSD8Q8NHS3 518 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 TRUB1Q8WWH5 349 aaKnown RBP11.88□□□□□ -0.51
CLK3-218ENST00000566926 LIPHQ8WWY8 451 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 KISS1RQ969F8 398 aaPredicted RBP11.88□□□□□ -0.51
CLK3-218ENST00000566926 APH1AQ96BI3 265 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 ZNF775Q96BV0 537 aaPredicted RBP11.88□□□□□ -0.51
CLK3-218ENST00000566926 SGTBQ96EQ0 304 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 ZNF570Q96NI8 536 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 YTHDF1Q9BYJ9 559 aaKnown RBP11.88□□□□□ -0.51
CLK3-218ENST00000566926 ACTR6Q9GZN1 396 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 NGBQ9NPG2 151 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 IL20Q9NYY1 176 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 REV1Q9UBZ9 1251 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 CDH10Q9Y6N8 788 aa11.88□□□□□ -0.51
CLK3-218ENST00000566926 TRAV36DV7A0A075B6V5 113 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 UNC119BA6NIH7 251 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 AQP7P3A6NL99 342 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 ZAR1LA6NP61 321 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms