RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 LINGO2Q7L985 606 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 MEX3DQ86XN8 651 aaKnown RBP12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 WDFY1Q8IWB7 410 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 TMEM123Q8N131 208 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 C17orf78Q8N4C9 275 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 ANKK1Q8NFD2 765 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 OR52N5Q8NH56 324 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 OR52J3Q8NH60 311 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 MBD6Q96DN6 1003 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 BOD1Q96IK1 185 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 LRGUKQ96M69 825 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 FOXC2Q99958 501 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 TMEM204Q9BSN7 226 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 MAGIXQ9H6Y5 334 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 UBTD1Q9HAC8 227 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 SLC25A15Q9Y619 301 aa12.14□□□□□ -0.47
HERPUD1-210ENST00000565966 SLC35F4A4IF30 521 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 DPRXA6NFQ7 191 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 RPL36A-HNRNPH2H7BZ11 118 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 GADD45GO95257 159 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 STAMBPO95630 424 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 PLAUP00749 431 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 F13BP05160 661 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 IFNGR1P15260 489 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 CD53P19397 219 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 RRM2P31350 389 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 SMIM11AP58511 58 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 CBX1P83916 185 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 FHL1Q13642 323 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 LAPTM4AQ15012 233 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 SEC23BQ15437 767 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 HMBOX1Q6NT76 420 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 C20orf204Q6ZNR8 217 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 TMPRSS11FQ6ZWK6 438 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 SLC35D2Q76EJ3 337 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 RRM2BQ7LG56 351 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 CDK20Q8IZL9 346 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 OR4K5Q8NGD3 323 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 MOSPD2Q8NHP6 518 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 POP5Q969H6 163 aaKnown RBP12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 ALKBH3Q96Q83 286 aaPredicted RBP12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 ZNF347Q96SE7 839 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 TRIM15Q9C019 465 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 SLC17A5Q9NRA2 495 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 HIF3AQ9Y2N7 669 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 AMDHD2Q9Y303 409 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 RNF115Q9Y4L5 304 aa12.13□□□□□ -0.47
HERPUD1-210ENST00000565966 A0A1W2PR80 420 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 SH3PXD2BA1X283 911 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 AQP12BA6NM10 295 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 ZNF726A6NNF4 738 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 EFCAB9A8MZ26 197 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 CDC42EP2O14613 210 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 SAGP10523 405 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 CDH2P19022 906 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 HOXC12P31275 282 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 GPR4P46093 362 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 OMPP47874 163 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 BIDP55957 195 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 RPS4XP62701 263 aaKnown RBP12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 ROR2Q01974 943 aaKnown RBP12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 CHRNB3Q05901 458 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 BSPH1Q075Z2 132 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 MELKQ14680 651 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 DEFB113Q30KQ7 82 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 FAM98BQ52LJ0 330 aaKnown RBP12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 PHYHD1Q5SRE7 291 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 CARD17Q5XLA6 110 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 ADAM5Q6NVV9 412 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 KLHL17Q6TDP4 642 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 SPNS3Q6ZMD2 512 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 LURAP1LQ8IV03 231 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 AQP12AQ8IXF9 295 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 C20orf196Q8IYI0 205 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 ADGRG5Q8IZF4 528 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 GPR137CQ8N3F9 429 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 WDR31Q8NA23 367 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 OR1K1Q8NGR3 316 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 OR6X1Q8NH79 312 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 PIGTQ969N2 578 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 LRR1Q96L50 414 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 ALPK1Q96QP1 1244 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 CXXC4Q9H2H0 198 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 INIPQ9NRY2 104 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 NPAP1Q9NZP6 1156 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 SLC7A8Q9UHI5 535 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 POMPQ9Y244 141 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 TMEM5Q9Y2B1 443 aa12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 MAGED1Q9Y5V3 778 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 MAP1AP78559 2803 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-210ENST00000565966 ITPR3Q14573 2671 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 TRAV27A0A087WT01 109 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 HS3ST1O14792 307 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 CLOCKO15516 846 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 BCL10O95999 233 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 WNT11O96014 354 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 HOXB1P14653 301 aaPredicted RBP12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 PAX7P23759 505 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 LIMS1P48059 325 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 SLC9A3P48764 834 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms