RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 MT-CO2P00403 227 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 RAF1P04049 648 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 NR3C1P04150 777 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 MBL2P11226 248 aaPredicted RBP2.78□□□□□ -1.97
CHD9-216ENST00000565803 CDH1P12830 882 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 ICAM2P13598 275 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 PIGAP37287 484 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 GZMKP49863 264 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 CAV2P51636 162 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 CLDN12P56749 244 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 RPS15AP62244 130 aaKnown RBP2.78□□□□□ -1.97
CHD9-216ENST00000565803 PAFAH1B2P68402 229 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 EWSR1Q01844 656 aaKnown RBP eCLIP2.78□□□□□ -1.97
CHD9-216ENST00000565803 ID2Q02363 134 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 NRN1LQ496H8 165 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 MIIPQ5JXC2 388 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 FAM102AQ5T9C2 384 aaPredicted RBP2.78□□□□□ -1.97
CHD9-216ENST00000565803 FAM166AQ6J272 317 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 TEPPQ6URK8 271 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 PLXDC2Q6UX71 529 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 CYHR1Q6ZMK1 362 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 PQLC2Q6ZP29 291 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 C22orf34Q6ZV56 151 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 SH2D5Q6ZV89 423 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 NUFIP2Q7Z417 695 aaKnown RBP2.78□□□□□ -1.97
CHD9-216ENST00000565803 MYPOPQ86VE0 399 aaPredicted RBP2.78□□□□□ -1.97
CHD9-216ENST00000565803 ZNF444Q8N0Y2 327 aaPredicted RBP2.78□□□□□ -1.97
CHD9-216ENST00000565803 SYS1Q8N2H4 156 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 OR4K1Q8NGD4 311 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 OR10A7Q8NGE5 316 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 ZFP28Q8NHY6 868 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 PSMG2Q969U7 264 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 BIRC7Q96CA5 298 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 BPIFA2Q96DR5 249 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 ZNF641Q96N77 438 aaPredicted RBP2.78□□□□□ -1.97
CHD9-216ENST00000565803 DOK1Q99704 481 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 AGPAT1Q99943 283 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 CMSS1Q9BQ75 279 aaKnown RBP2.78□□□□□ -1.97
CHD9-216ENST00000565803 PECRQ9BY49 303 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 HOXD1Q9GZZ0 328 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 SPRTNQ9H040 489 aaPredicted RBP2.78□□□□□ -1.97
CHD9-216ENST00000565803 RDH14Q9HBH5 336 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 NMRAL1Q9HBL8 299 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 B3GAT2Q9NPZ5 323 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 GPR173Q9NS66 373 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 ABHD10Q9NUJ1 306 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 NLE1Q9NVX2 485 aaPredicted RBP2.78□□□□□ -1.97
CHD9-216ENST00000565803 PPP4R1LQ9P1A2 415 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 KLHL13Q9P2N7 655 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 KIF25Q9UIL4 384 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 SLC7A7Q9UM01 511 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 ADAMTS5Q9UNA0 930 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 PPIAL4CA0A0B4J2A2 164 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 TRBV11-1A0A0K0K1C0 115 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 CCDC195A0A1B0GUA6 201 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 A0A1B0GVI7 797 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 LINC01553A4QN01 128 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 PRRG2O14669 202 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 SCO2O43819 266 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 SNX3O60493 162 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 CLDN9O95484 217 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 CRHP06850 196 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 GP1BAP07359 652 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 ACSM4P0C7M7 580 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 ADORA3P0DMS8 318 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 PPIAL4GP0DN37 164 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 SAGP10523 405 aaPredicted RBP2.77□□□□□ -1.97
CHD9-216ENST00000565803 SFTPDP35247 375 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 GLP1RP43220 463 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 KIR2DL3P43628 341 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 KIR3DL1P43629 444 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 SLC6A8P48029 635 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 HCAR3P49019 387 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 BIDP55957 195 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 C2orf80Q0P641 193 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 ATP6V1FQ16864 119 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 CHRFAM7AQ494W8 412 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 VWA2Q5GFL6 755 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 HECTD2Q5U5R9 776 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 ZNF776Q68DI1 518 aaPredicted RBP2.77□□□□□ -1.97
CHD9-216ENST00000565803 APOBEC3HQ6NTF7 200 aaKnown RBP2.77□□□□□ -1.97
CHD9-216ENST00000565803 SMARCD3Q6STE5 483 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 LINGO4Q6UY18 593 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 RBMS3Q6XE24 437 aaKnown RBP2.77□□□□□ -1.97
CHD9-216ENST00000565803 STOX1Q6ZVD7 989 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 TMEM144Q7Z5S9 345 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 MOB3BQ86TA1 216 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 PRUNE1Q86TP1 453 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 C10orf107Q8IVU9 208 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 SMIM20Q8N5G0 67 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 ATPAF2Q8N5M1 289 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 EMC1Q8N766 993 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 KLHDC1Q8N7A1 406 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 CDRT4Q8N9R6 151 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 SLC16A11Q8NCK7 471 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 NOXO1Q8NFA2 376 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 OR8G5Q8NG78 346 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 ACTL9Q8TC94 416 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 GPR151Q8TDV0 419 aa2.77□□□□□ -1.97
CHD9-216ENST00000565803 SMARCD2Q92925 531 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms