RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 OR2A14Q96R47 310 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 OPN3Q9H1Y3 402 aaPredicted RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 UBE2ZQ9H832 354 aaPredicted RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 BOKQ9UMX3 212 aaPredicted RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 PCDHB10Q9UN67 800 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 ICKQ9UPZ9 632 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 CSNK1G3Q9Y6M4 447 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 A0A0A6YYC8 382 aaPredicted RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 C20orf202A1L168 122 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 I3L1I5 382 aaPredicted RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 TCAPO15273 167 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 CPNE3O75131 537 aaKnown RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 SYNGR4O95473 234 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 SCG5P05408 212 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 PNLIPP16233 465 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 ZNF20P17024 532 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 S100A2P29034 98 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 TPMTP51580 245 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 C21orf58P58505 322 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 MAD2L1BPQ15013 274 aaPredicted RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 GRK1Q15835 563 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 ACSM3Q53FZ2 586 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 GCNT6Q5T4J0 391 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 XAF1Q6GPH4 301 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 ZNF367Q7RTV3 350 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 NPEPL1Q8NDH3 523 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 OR14A16Q8NHC5 309 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 MAFAQ8NHW3 353 aaPredicted RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 GORASP2Q9H8Y8 452 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 SLC35D1Q9NTN3 355 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 STEAP1Q9UHE8 339 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 MAP1AP78559 2803 aaPredicted RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 A0A1W2PQ09 198 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 RGS9O75916 674 aaPredicted RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 CD14P08571 375 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 HOXC4P09017 264 aaPredicted RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 ACAA1P09110 424 aaPredicted RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 LIPCP11150 499 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 OMGP23515 440 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 RAB4BP61018 213 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 CBFBQ13951 182 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 GINS1Q14691 196 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 ATP6AP1Q15904 470 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 ZNF658BQ4V348 819 aaPredicted RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 ZNF57Q68EA5 555 aaPredicted RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 TAF8Q7Z7C8 310 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 HSD17B8Q92506 261 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 CNOT9Q92600 299 aaKnown RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 DVL3Q92997 716 aaPredicted RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 C8orf44Q96CB5 159 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 RRNAD1Q96FB5 475 aaKnown RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 GMPPAQ96IJ6 420 aaPredicted RBP3.09□□□□□ -1.92
CHD9-213ENST00000564845 HSH2DQ96JZ2 352 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 DOHHQ9BU89 302 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 MED28Q9H204 178 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 ZCCHC4Q9H5U6 513 aa3.09□□□□□ -1.92
CHD9-213ENST00000564845 H7C2Y5 167 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 SULT2B1O00204 365 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 CORTO00230 105 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 UPK1AO00322 258 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 SLC31A2O15432 143 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 CA11O75493 328 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 WDPCPO95876 746 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 HLA-DQA2P01906 255 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 GP2P55259 537 aaKnown RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 SLAMF1Q13291 335 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 ZIC1Q15915 447 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 NDUFAF5Q5TEU4 345 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 PNCKQ6P2M8 343 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 Q6ZSR6 202 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 ZFAND4Q86XD8 727 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 BPIFCQ8NFQ6 507 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 OR8J2Q8NGG1 315 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 OR5K1Q8NHB7 308 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 FBXW5Q969U6 566 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 ELP4Q96EB1 424 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 CCDC115Q96NT0 180 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 DCLRE1CQ96SD1 692 aaKnown RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 MBOAT4Q96T53 435 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 MED18Q9BUE0 208 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 TMED9Q9BVK6 235 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 DNTTIP1Q9H147 329 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 C14orf119Q9NWQ9 140 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 LAMP5Q9UJQ1 280 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 HS3ST3A1Q9Y663 406 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 TICRRQ7Z2Z1 1910 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 FAM240BA0A1B0GVZ2 78 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 HPGDSO60760 199 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 THBS1P07996 1170 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 RPA2P15927 270 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 HIST1H1BP16401 226 aaKnown RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 ZNF28P17035 718 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 CCR5P51681 352 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 RHDQ02161 417 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 IL10RAQ13651 578 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 CDNFQ49AH0 187 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 BCL2L15Q5TBC7 163 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 THNSL2Q86YJ6 484 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 ADGRG5Q8IZF4 528 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 OR2L5Q8NG80 312 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms