RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 MAT1AQ00266 395 aaKnown RBP4.31□□□□□ -1.72
CAPN3-212ENST00000564503 TLE2Q04725 743 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 TGM3Q08188 693 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 CDK5R1Q15078 307 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 MPPED2Q15777 294 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 UAP1L1Q3KQV9 507 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 LINC00303Q3SY05 128 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 TMEM35AQ53FP2 167 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 ZNF805Q5CZA5 627 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 C1QL3Q5VWW1 255 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 HEPHL1Q6MZM0 1159 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 RPL22L1Q6P5R6 122 aaKnown RBP4.31□□□□□ -1.72
CAPN3-212ENST00000564503 FAM199XQ6PEV8 388 aaPredicted RBP4.31□□□□□ -1.72
CAPN3-212ENST00000564503 ALKAL2Q6UX46 152 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 ZNF836Q6ZNA1 936 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 ESPNLQ6ZVH7 1005 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 TMCO2Q7Z6W1 182 aaPredicted RBP4.31□□□□□ -1.72
CAPN3-212ENST00000564503 HMGN2P46Q86SG4 172 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 RANBP3LQ86VV4 465 aaPredicted RBP4.31□□□□□ -1.72
CAPN3-212ENST00000564503 TMEM173Q86WV6 379 aaPredicted RBP4.31□□□□□ -1.72
CAPN3-212ENST00000564503 TMEM17Q86X19 198 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 CDK20Q8IZL9 346 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 SYS1Q8N2H4 156 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 HDDC3Q8N4P3 179 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 RAB42Q8N4Z0 105 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 LMNTD1Q8N9Z9 388 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 POMGNT2Q8NAT1 580 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 DNAAF1Q8NEP3 725 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 OR4D9Q8NGE8 314 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 OR5M9Q8NGP3 310 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 OR2A12Q8NGT7 310 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 OR2L2Q8NH16 312 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 OR52I2Q8NH67 350 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 THEM6Q8WUY1 208 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 TMEM255BQ8WV15 326 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 AUTS2Q8WXX7 1259 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 CNOT9Q92600 299 aaKnown RBP4.31□□□□□ -1.72
CAPN3-212ENST00000564503 NSMAFQ92636 917 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 PIGKQ92643 395 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 GHSRQ92847 366 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 ORAI1Q96D31 301 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 SMIM19Q96E16 107 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 TCEAL4Q96EI5 215 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 DTD2Q96FN9 168 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 S100A16Q96FQ6 103 aaKnown RBP4.31□□□□□ -1.72
CAPN3-212ENST00000564503 SIPA1Q96FS4 1042 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 C16orf58Q96GQ5 468 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 LRIG1Q96JA1 1093 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 LRFN5Q96NI6 719 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 IL17FQ96PD4 163 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 TEAD3Q99594 435 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 UQCC2Q9BRT2 126 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 GINS4Q9BRT9 223 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 C1QTNF6Q9BXI9 259 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 ACTRT3Q9BYD9 372 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 DPH1Q9BZG8 443 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 SLC7A5P2Q9GIP4 190 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 MS4A7Q9GZW8 240 aaPredicted RBP4.31□□□□□ -1.72
CAPN3-212ENST00000564503 ARL6Q9H0F7 186 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 DNTTIP1Q9H147 329 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 OR52A5Q9H2C5 316 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 EVA1AQ9H8M9 152 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 MED20Q9H944 212 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 MCCC2Q9HCC0 563 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 LHX9Q9NQ69 397 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 CMC2Q9NRP2 79 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 CA10Q9NS85 328 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 C14orf105Q9NVL8 296 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 SLC39A1Q9NY26 324 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 TAS2R10Q9NYW0 307 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 MRPL15Q9P015 296 aaKnown RBP4.31□□□□□ -1.72
CAPN3-212ENST00000564503 TAC3Q9UHF0 121 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 IL20RAQ9UHF4 553 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 ZNF223Q9UK11 482 aaPredicted RBP4.31□□□□□ -1.72
CAPN3-212ENST00000564503 GMEB2Q9UKD1 530 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 FLVCR2Q9UPI3 526 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 PLCL2Q9UPR0 1127 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 FOXJ3Q9UPW0 622 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 SLC35A3Q9Y2D2 325 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 AK6Q9Y3D8 172 aaKnown RBP4.31□□□□□ -1.72
CAPN3-212ENST00000564503 INSL5Q9Y5Q6 135 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 ETV7Q9Y603 341 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 GOLGB1Q14789 3259 aaKnown RBP4.31□□□□□ -1.72
CAPN3-212ENST00000564503 PHF3Q92576 2039 aaKnown RBP4.31□□□□□ -1.72
CAPN3-212ENST00000564503 C2orf16Q68DN1 1984 aa4.31□□□□□ -1.72
CAPN3-212ENST00000564503 A0A087WV62 115 aa4.3□□□□□ -1.72
CAPN3-212ENST00000564503 A0A087X0M5 115 aa4.3□□□□□ -1.72
CAPN3-212ENST00000564503 TBC1D3EA0A087X179 549 aa4.3□□□□□ -1.72
CAPN3-212ENST00000564503 A0A0B4J203 849 aa4.3□□□□□ -1.72
CAPN3-212ENST00000564503 A0A0D9SG52 128 aa4.3□□□□□ -1.72
CAPN3-212ENST00000564503 A0A1B0GX30 115 aa4.3□□□□□ -1.72
CAPN3-212ENST00000564503 FEZF1A0PJY2 475 aa4.3□□□□□ -1.72
CAPN3-212ENST00000564503 ANTXRLA6NF34 631 aa4.3□□□□□ -1.72
CAPN3-212ENST00000564503 GLTPD2A6NH11 291 aa4.3□□□□□ -1.72
CAPN3-212ENST00000564503 ZNF98A6NK75 572 aa4.3□□□□□ -1.72
CAPN3-212ENST00000564503 PCP4L1A6NKN8 68 aa4.3□□□□□ -1.72
CAPN3-212ENST00000564503 RFPL4AA6NLU0 287 aa4.3□□□□□ -1.72
CAPN3-212ENST00000564503 FAM25EA8MYX2 175 aa4.3□□□□□ -1.72
CAPN3-212ENST00000564503 RFPL4AL1F8VTS6 287 aa4.3□□□□□ -1.72
CAPN3-212ENST00000564503 TEX46H3BTG2 121 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms