RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 COPEO14579 308 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 AIM2O14862 343 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 TRAF3IP2O43734 574 aaPredicted RBP6.21□□□□□ -1.42
VPS4A-203ENST00000564399 TRIM13O60858 407 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 UBL3O95164 117 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 ABHD2P08910 425 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 PATE4P0C8F1 98 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 PPIAL4FP0DN26 164 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 NR2F1P10589 423 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 MAKP20794 623 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 DRD4P21917 467 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 ACAA2P42765 397 aaKnown RBP6.21□□□□□ -1.42
VPS4A-203ENST00000564399 RAG2P55895 527 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 CLDN8P56748 225 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 GLO1Q04760 184 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 CKAP4Q07065 602 aaKnown RBP6.21□□□□□ -1.42
VPS4A-203ENST00000564399 SLC3A1Q07837 685 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 RBBP4Q09028 425 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 ZNF154Q13106 437 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 CAMK2DQ13557 499 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 MFSD13AQ14CX5 517 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 MOGQ16653 247 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 TUSC1Q2TAM9 212 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 XKR7Q5GH72 579 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 ZNF362Q5T0B9 420 aaPredicted RBP6.21□□□□□ -1.42
VPS4A-203ENST00000564399 OLFML2AQ68BL7 652 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 LRRC74BQ6ZQY2 392 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 JAZF1Q86VZ6 243 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 SNX32Q86XE0 403 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 RNF130Q86XS8 419 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 TMEM123Q8N131 208 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 OR52E2Q8NGJ4 325 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 OR6N1Q8NGY5 312 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 OR4F5Q8NH21 305 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 ZDHHC16Q969W1 377 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 TRIM44Q96DX7 344 aaPredicted RBP6.21□□□□□ -1.42
VPS4A-203ENST00000564399 NEURL3Q96EH8 262 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 KTI12Q96EK9 354 aaPredicted RBP6.21□□□□□ -1.42
VPS4A-203ENST00000564399 FOXB1Q99853 325 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 RBM4BQ9BQ04 359 aaKnown RBP6.21□□□□□ -1.42
VPS4A-203ENST00000564399 SLC35A5Q9BS91 424 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 EMC6Q9BV81 110 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 CDH20Q9HBT6 801 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 TNFRSF19Q9NS68 423 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 B3GAT1Q9P2W7 334 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 SEC14L4Q9UDX3 406 aa6.21□□□□□ -1.42
VPS4A-203ENST00000564399 PLXNB1O43157 2135 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 TANC2Q9HCD6 1990 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 IGLV3-9A0A075B6K5 115 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 CDHR4A6H8M9 788 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 FAM181BA6NEQ2 426 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 ZNF726A6NNF4 738 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 M0R082 166 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 SPRY3O43610 288 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 OR2T1O43869 369 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 NPIPB7O75200 414 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 SERPINA5P05154 406 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 SBK2P0C263 348 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 OR8G3PP0DMU2 310 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 CCL2P13500 99 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 PRG2P13727 222 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 NQO1P15559 274 aaKnown RBP6.2□□□□□ -1.42
VPS4A-203ENST00000564399 ZNF250P15622 560 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 RPS4Y1P22090 263 aaKnown RBP6.2□□□□□ -1.42
VPS4A-203ENST00000564399 CBLP22681 906 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 GRPRP30550 384 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 CRHR1P34998 444 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 ANXA11P50995 505 aaKnown RBP6.2□□□□□ -1.42
VPS4A-203ENST00000564399 ZNF81P51508 661 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 ERVS71-1P61550 626 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 MAD2L1Q13257 205 aaPredicted RBP6.2□□□□□ -1.42
VPS4A-203ENST00000564399 LIN52Q52LA3 116 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 ANXA8L1Q5VT79 327 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 SYT10Q6XYQ8 523 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 ZNF836Q6ZNA1 936 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 H1FNTQ75WM6 255 aaPredicted RBP6.2□□□□□ -1.42
VPS4A-203ENST00000564399 RHOUQ7L0Q8 258 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 TRMT10CQ7L0Y3 403 aaKnown RBP6.2□□□□□ -1.42
VPS4A-203ENST00000564399 ZNF572Q7Z3I7 529 aaPredicted RBP6.2□□□□□ -1.42
VPS4A-203ENST00000564399 VRK2Q86Y07 508 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 UEVLDQ8IX04 471 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 C20orf196Q8IYI0 205 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 CNPY4Q8N129 248 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 MIER2Q8N344 545 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 CPEB3Q8NE35 698 aaKnown RBP6.2□□□□□ -1.42
VPS4A-203ENST00000564399 SLC30A7Q8NEW0 376 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 OR8J2Q8NGG1 315 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 OR52P1PQ8NH57 321 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 ZNF417Q8TAU3 575 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 ZNF519Q8TB69 540 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 PNPT1Q8TCS8 783 aaKnown RBP6.2□□□□□ -1.42
VPS4A-203ENST00000564399 MZB1Q8WU39 189 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 GTF3AQ92664 365 aaKnown RBP6.2□□□□□ -1.42
VPS4A-203ENST00000564399 DCLRE1CQ96SD1 692 aaKnown RBP6.2□□□□□ -1.42
VPS4A-203ENST00000564399 ZNF587Q96SQ5 575 aaPredicted RBP6.2□□□□□ -1.42
VPS4A-203ENST00000564399 CITED1Q99966 193 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 PTDSS2Q9BVG9 487 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 ULBP2Q9BZM5 246 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 RNF121Q9H920 327 aa6.2□□□□□ -1.42
VPS4A-203ENST00000564399 ZNF224Q9NZL3 707 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms