RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 ALDOBP05062 364 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 CASQ1P31415 396 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 ATP5C1P36542 298 aaKnown RBP1.87□□□□□ -2.11
CHD9-209ENST00000564255 AQP2P41181 271 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 CDKN1BP46527 198 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 SLC11A1P49279 550 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 CSNK1G2P78368 415 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 TGFBR3Q03167 851 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 IFT88Q13099 833 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 SLC25A30Q5SVS4 291 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 ANGPTL8Q6UXH0 198 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 SLC16A14Q7RTX9 510 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 CEND1Q8N111 149 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 VN1R2Q8NFZ6 395 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 OR2G2Q8NGZ5 317 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 SPATA3Q8NHX4 192 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 ANP32BQ92688 251 aaKnown RBP1.87□□□□□ -2.11
CHD9-209ENST00000564255 SGK3Q96BR1 496 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 CCDC126Q96EE4 140 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 DUS3LQ96G46 650 aaKnown RBP1.87□□□□□ -2.11
CHD9-209ENST00000564255 CFAP53Q96M91 514 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 ATP5SQ99766 215 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 TSG101Q99816 390 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 PTGES2Q9H7Z7 377 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 EXD2Q9NVH0 621 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 AIG1Q9NVV5 245 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 KCNIP1Q9NZI2 227 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 CLN8Q9UBY8 286 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 BTNL2Q9UIR0 455 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 ZNF256Q9Y2P7 627 aaPredicted RBP1.87□□□□□ -2.11
CHD9-209ENST00000564255 MRC2Q9UBG0 1479 aa1.87□□□□□ -2.11
CHD9-209ENST00000564255 COL22A1Q8NFW1 1626 aaPredicted RBP1.87□□□□□ -2.11
CHD9-209ENST00000564255 LRRIQ3A6PVS8 624 aaPredicted RBP1.86□□□□□ -2.11
CHD9-209ENST00000564255 GOLGA8TH3BQL2 631 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 CLPXO76031 633 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 PSMB1P20618 241 aaKnown RBP1.86□□□□□ -2.11
CHD9-209ENST00000564255 GSTM3P21266 225 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 OR3A4PP47883 348 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 RFX3P48380 749 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 PAX5Q02548 391 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 SELENBP1Q13228 472 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 EOGTQ5NDL2 527 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 C9orf129Q5T035 196 aaKnown RBP1.86□□□□□ -2.11
CHD9-209ENST00000564255 GPR157Q5UAW9 335 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 KRTAP5-1Q6L8H4 278 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 Q6ZN92 141 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 TMEM135Q86UB9 458 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 MYPOPQ86VE0 399 aaPredicted RBP1.86□□□□□ -2.11
CHD9-209ENST00000564255 FBXO16Q8IX29 292 aaPredicted RBP1.86□□□□□ -2.11
CHD9-209ENST00000564255 ZNF100Q8IYN0 542 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 C8orf31Q8N9H6 132 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 RHEBL1Q8TAI7 183 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 SLC29A1Q99808 456 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 PELOQ9BRX2 385 aaKnown RBP1.86□□□□□ -2.11
CHD9-209ENST00000564255 NICN1Q9BSH3 213 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 ELOVL6Q9H5J4 265 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 MRPL47Q9HD33 250 aaKnown RBP1.86□□□□□ -2.11
CHD9-209ENST00000564255 CD274Q9NZQ7 290 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 XCL2Q9UBD3 114 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 TRAF3IP3Q9Y228 551 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 MMP24Q9Y5R2 645 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 WDR62O43379 1518 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 HCFC1P51610 2035 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 TNRQ92752 1358 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 A0A0G2JLM5 398 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 KIR2DL5BA0A0G2JN68 375 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 KIR2DL5BA0A0G2JPC4 375 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 KLF18A0A0U1RQI7 1052 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 PSMB11A5LHX3 300 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 SMCO2A6NFE2 343 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 AIM2O14862 343 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 TCN1P20061 433 aaPredicted RBP1.86□□□□□ -2.11
CHD9-209ENST00000564255 GTF2E2P29084 291 aaKnown RBP1.86□□□□□ -2.11
CHD9-209ENST00000564255 RORAP35398 523 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 SLC1A1P43005 524 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 VDAC2P45880 294 aaPredicted RBP1.86□□□□□ -2.11
CHD9-209ENST00000564255 GPR6P46095 362 aaPredicted RBP1.86□□□□□ -2.11
CHD9-209ENST00000564255 UQCRFS1P47985 274 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 IRF8Q02556 426 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 ACVR1Q04771 509 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 PDIA2Q13087 525 aaKnown RBP1.86□□□□□ -2.11
CHD9-209ENST00000564255 PGGHGQ32M88 737 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 AGBL2Q5U5Z8 902 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 REEP3Q6NUK4 255 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 ZNF571Q7Z3V5 609 aaPredicted RBP1.86□□□□□ -2.11
CHD9-209ENST00000564255 MMAAQ8IVH4 418 aaKnown RBP1.86□□□□□ -2.11
CHD9-209ENST00000564255 KIR2DL5AQ8N109 375 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 PDIK1LQ8N165 341 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 ZADH2Q8N4Q0 377 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 ZNF321PQ8N8H1 164 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 KIR2DL5BQ8NHK3 375 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 GPX8Q8TED1 209 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 PRRC1Q96M27 445 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 DEFB127Q9H1M4 99 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 TDRD3Q9H7E2 651 aaKnown RBP1.86□□□□□ -2.11
CHD9-209ENST00000564255 UGT1A10Q9HAW8 530 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 QPCTLQ9NXS2 382 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 PTTG3PQ9NZH4 202 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 LSM7Q9UK45 103 aaKnown RBP1.86□□□□□ -2.11
CHD9-209ENST00000564255 CLEC4EQ9ULY5 219 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms