RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 OR6T1Q8NGN1 323 aa14.89□□□□□ -0.03
VPS9D1-203ENST00000563798 OR5J2Q8NH18 312 aa14.89□□□□□ -0.03
VPS9D1-203ENST00000563798 FOXN4Q96NZ1 517 aa14.89□□□□□ -0.03
VPS9D1-203ENST00000563798 ZNF426Q9BUY5 554 aa14.89□□□□□ -0.03
VPS9D1-203ENST00000563798 EMC6Q9BV81 110 aa14.89□□□□□ -0.03
VPS9D1-203ENST00000563798 VIPAS39Q9H9C1 493 aa14.89□□□□□ -0.03
VPS9D1-203ENST00000563798 CUBNO60494 3623 aa14.89□□□□□ -0.03
VPS9D1-203ENST00000563798 RTTNQ86VV8 2226 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 ZNF726A6NNF4 738 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 LRRN3E7EW58 273 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 hCG_2039718K7EN88 272 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 M0R3H8 397 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 EDF1O60869 148 aaKnown RBP14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 THY1P04216 161 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 IGFBP1P08833 259 aaPredicted RBP14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 ZNF35P13682 527 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 ZNF14P17017 642 aaPredicted RBP14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 CD247P20963 164 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 NR4A1P22736 598 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 PCGF2P35227 344 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 EVX1P49640 407 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 GZMMP51124 257 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 MTPNP58546 118 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 SELPLGQ14242 412 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 ZNF74Q16587 644 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 CYP51A1Q16850 503 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 GSG1Q2KHT4 349 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 CARD17Q5XLA6 110 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 RNF217Q8TC41 542 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 MPP4Q96JB8 637 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 SLC19A3Q9BZV2 496 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 NOX3Q9HBY0 568 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 ZNF224Q9NZL3 707 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 POFUT2Q9Y2G5 429 aa14.88□□□□□ -0.03
VPS9D1-203ENST00000563798 STAB1Q9NY15 2570 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 IGHV4-61A0A0C4DH41 118 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 LMX1BO60663 402 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 SEC14L2O76054 403 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 STAMBPO95630 424 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 HLA-HP01893 362 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 ZNF16P17020 682 aaPredicted RBP14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 ZNF23P17027 643 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 NPRL3Q12980 569 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 DAG1Q14118 895 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 GGTLC2Q14390 218 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 ENTPD8Q5MY95 495 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 WDR88Q6ZMY6 472 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 ZNF813Q6ZN06 617 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 CCDC80Q76M96 950 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 OR4D11Q8NGI4 311 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 OR6N1Q8NGY5 312 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 OR6X1Q8NH79 312 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 ADAMTS16Q8TE57 1224 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 TMEM54Q969K7 222 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 TAMM41Q96BW9 452 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 FOXB1Q99853 325 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 BEX2Q9BXY8 128 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 ULBP2Q9BZM5 246 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 TAS2R5Q9NYW4 299 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 FBXL3Q9UKT7 428 aa14.87□□□□□ -0.03
VPS9D1-203ENST00000563798 TRAPPC13A5PLN9 417 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 OPN1SWP03999 348 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 ERCC1P07992 297 aaPredicted RBP14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 ADORA3P0DMS8 318 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 APEHP13798 732 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 AHCYP23526 432 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 CAPZA2P47755 286 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 SNTB2Q13425 540 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 CAMK2DQ13557 499 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 NFYCQ13952 458 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 INTS11Q5TA45 600 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 FAM166AQ6J272 317 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 HDXQ7Z353 690 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 PIWIL3Q7Z3Z3 882 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 SPATA21Q7Z572 469 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 TSPYL5Q86VY4 417 aaPredicted RBP14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 RBM45Q8IUH3 476 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 ZNF786Q8N393 782 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 SVOPLQ8N434 492 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 C10orf53Q8N6V4 93 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 RASSF5Q8WWW0 418 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 TMEM158Q8WZ71 300 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 MSI2Q96DH6 328 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 BPESC1Q9GZL8 116 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 SHARPINQ9H0F6 387 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 CMAHPQ9Y471 501 aa14.86□□□□□ -0.03
VPS9D1-203ENST00000563798 RNF212BA8MTL3 300 aa14.85□□□□□ -0.03
VPS9D1-203ENST00000563798 UBL3O95164 117 aa14.85□□□□□ -0.03
VPS9D1-203ENST00000563798 TACSTD2P09758 323 aa14.85□□□□□ -0.03
VPS9D1-203ENST00000563798 ASAH2BP0C7U1 165 aa14.85□□□□□ -0.03
VPS9D1-203ENST00000563798 DAOP14920 347 aa14.85□□□□□ -0.03
VPS9D1-203ENST00000563798 IFNGR1P15260 489 aa14.85□□□□□ -0.03
VPS9D1-203ENST00000563798 IGFBP5P24593 272 aa14.85□□□□□ -0.03
VPS9D1-203ENST00000563798 GLRXP35754 106 aa14.85□□□□□ -0.03
VPS9D1-203ENST00000563798 CSNK1A1P48729 337 aa14.85□□□□□ -0.03
VPS9D1-203ENST00000563798 CRYBA2P53672 197 aa14.85□□□□□ -0.03
VPS9D1-203ENST00000563798 RAB1AP62820 205 aa14.85□□□□□ -0.03
VPS9D1-203ENST00000563798 FXNQ16595 210 aa14.85□□□□□ -0.03
VPS9D1-203ENST00000563798 VMACQ2NL98 169 aa14.85□□□□□ -0.03
VPS9D1-203ENST00000563798 TTC33Q6PID6 262 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms