RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 CDKN2CP42773 168 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ARPC4P59998 168 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 NTHL1P78549 312 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ADIGQ0VDE8 80 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SERTAD2Q14140 314 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ZNF77Q15935 545 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SGCAQ16586 387 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ISXQ2M1V0 245 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 UTF1Q5T230 341 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 C9orf135Q5VTT2 229 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 BSPRYQ5W0U4 402 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 TCEAL6Q6IPX3 200 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SPOPLQ6IQ16 392 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 PLEKHG7Q6ZR37 379 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ZNF621Q6ZSS3 439 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 CLEC20AQ6ZU45 233 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 STRADAQ7RTN6 431 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 PHF13Q86YI8 300 aaPredicted RBP4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SYS1Q8N2H4 156 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 CLIP4Q8N3C7 705 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 CCDC185Q8N715 623 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 UBL4BQ8N7F7 174 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 C12orf29Q8N999 325 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 NEXN-AS1Q8NBZ9 246 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 PLPPR1Q8TBJ4 325 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 PHLDA1Q8WV24 401 aaPredicted RBP4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 TFGQ92734 400 aaPredicted RBP4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 NUS1Q96E22 293 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 TMA16Q96EY4 203 aaKnown RBP4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SERAC1Q96JX3 654 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 B3GALT6Q96L58 329 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 CNN2Q99439 309 aaKnown RBP4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SSBP3Q9BWW4 388 aaPredicted RBP4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ULBP2Q9BZM5 246 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SRRQ9GZT4 340 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ZNF703Q9H7S9 590 aaPredicted RBP4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 S100A14Q9HCY8 104 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SLC40A1Q9NP59 571 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 NRN1Q9NPD7 142 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SIRT7Q9NRC8 400 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 NECAP2Q9NVZ3 263 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 DUS2Q9NX74 493 aaKnown RBP4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 MRPL39Q9NYK5 338 aaKnown RBP4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ST6GALNAC2Q9UJ37 374 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ALG6Q9Y672 507 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 MYO9BQ13459 2157 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 CEP290O15078 2479 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SIP14410 1827 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 A0A1W2PQ67 120 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 CLEC18AA5D8T8 446 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 F5H5T6 163 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 M0QXV9 152 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 EPHB6O15197 1021 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 RAD51BO15315 384 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 PSTPIP1O43586 416 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 APODP05090 189 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 GP1BBP13224 206 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ZNF20P17024 532 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 NPR2P20594 1047 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 GPD1P21695 349 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 COMTP21964 271 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 CA4P22748 312 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 CCKBRP32239 447 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ACVR1BP36896 505 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 MAGEA6P43360 314 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 CSNK1DP48730 415 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ZXDAP98168 799 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 MTF1Q14872 753 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 UBE2V2Q15819 145 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 FGD3Q5JSP0 725 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SAMD4BQ5PRF9 694 aaKnown RBP4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SYCE2Q6PIF2 218 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 CLEC18BQ6UXF7 455 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 HACD2Q6Y1H2 254 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 Q6ZSV7 163 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 UTS2BQ765I0 119 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 PIWIL4Q7Z3Z4 852 aaKnown RBP4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SLC47A2Q86VL8 602 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 CCDC50Q8IVM0 306 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ARHGEF19Q8IW93 802 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SLC35F2Q8IXU6 374 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ZBED8Q8IZ13 594 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ZNF786Q8N393 782 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 MAPKAPK5-AS1Q8N8E1 139 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 PNLDC1Q8NA58 520 aaKnown RBP4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 CLEC18CQ8NCF0 446 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 OR5T1Q8NG75 326 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 OR7A2PQ8NGA2 310 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 OR2AP1Q8NGE2 309 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 OR56A4Q8NGH8 313 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 OR2L8Q8NGY9 312 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SORCS1Q8WY21 1168 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 APH1AQ96BI3 265 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 RNF170Q96K19 258 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 JSRP1Q96MG2 331 aaPredicted RBP4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 KRTAP9-3Q9BYQ3 159 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 UCK2Q9BZX2 261 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 DERL2Q9GZP9 239 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 NAA50Q9GZZ1 169 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms