RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 SARNPP82979 210 aaKnown RBP3.08□□□□□ -1.92
HERC1-211ENST00000560983 EMX1Q04741 257 aaPredicted RBP3.08□□□□□ -1.92
HERC1-211ENST00000560983 LCP2Q13094 533 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 MAD2L1BPQ15013 274 aaPredicted RBP3.08□□□□□ -1.92
HERC1-211ENST00000560983 PDK3Q15120 406 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 TRADDQ15628 312 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 LTB4RQ15722 352 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 ANXA2RQ3ZCQ2 193 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 TCTEX1D4Q5JR98 221 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 TSPO2Q5TGU0 170 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 CLEC6AQ6EIG7 209 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 OR52E8Q6IFG1 317 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 FAM180BQ6P0A1 224 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 GSG1LQ6UXU4 331 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 ZNF771Q7L3S4 317 aaPredicted RBP3.08□□□□□ -1.92
HERC1-211ENST00000560983 SLC44A2Q8IWA5 706 aaPredicted RBP3.08□□□□□ -1.92
HERC1-211ENST00000560983 CCDC28AQ8IWP9 274 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 CNTN4Q8IWV2 1026 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 OR7G3Q8NG95 312 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 OR4S1Q8NGB4 309 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 NUDCD2Q8WVJ2 157 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 SSMEM1Q8WWF3 244 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 RAB8BQ92930 207 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 TRIM44Q96DX7 344 aaPredicted RBP3.08□□□□□ -1.92
HERC1-211ENST00000560983 CMTM7Q96FZ5 175 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 PDLIM5Q96HC4 596 aaKnown RBP3.08□□□□□ -1.92
HERC1-211ENST00000560983 FAM71F1Q96KD3 344 aaPredicted RBP3.08□□□□□ -1.92
HERC1-211ENST00000560983 ELOVL1Q9BW60 279 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 CAPS2Q9BXY5 557 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 CCDC68Q9H2F9 335 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 ZNF385DQ9H6B1 395 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 TMEM165Q9HC07 324 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 KCNK9Q9NPC2 374 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 CHMP5Q9NZZ3 219 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 NOSIPQ9Y314 301 aaKnown RBP3.08□□□□□ -1.92
HERC1-211ENST00000560983 SIGLEC9Q9Y336 463 aa3.08□□□□□ -1.92
HERC1-211ENST00000560983 LSM4Q9Y4Z0 139 aaKnown RBP3.08□□□□□ -1.92
HERC1-211ENST00000560983 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.08□□□□□ -1.929e-7■□□□□ 9.3
HERC1-211ENST00000560983 DNAH17Q9UFH2 4485 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 IGHV2OR16-5A0A0B4J2B6 119 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 ZCWPW2A0A1B0GU75 182 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 OR6C65A6NJZ3 312 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 IFITM10A6NMD0 228 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 E7EVH7 732 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 E9PQ18 207 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 FOXE1O00358 373 aaPredicted RBP3.07□□□□□ -1.92
HERC1-211ENST00000560983 NR5A2O00482 541 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 ZNF189O75820 626 aaPredicted RBP3.07□□□□□ -1.92
HERC1-211ENST00000560983 IGKV1D-16P01601 117 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 GBAP04062 536 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 CSNK2A2P19784 350 aaPredicted RBP3.07□□□□□ -1.92
HERC1-211ENST00000560983 KRT20P35900 424 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 FDFT1P37268 417 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 EIF1P41567 113 aaKnown RBP3.07□□□□□ -1.92
HERC1-211ENST00000560983 IER3P46695 156 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 HNMTP50135 292 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 EFNB2P52799 333 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 ARFIP1P53367 373 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 TUBA1BP68363 451 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 PSPHP78330 225 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 CCL8P80075 99 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 CDKL1Q00532 357 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 SLC18A2Q05940 514 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 SLC18A3Q16572 532 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 NSUN5P1Q3KNT7 163 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 FBXO48Q5FWF7 155 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 TECRLQ5HYJ1 363 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 OTUD3Q5T2D3 398 aaPredicted RBP3.07□□□□□ -1.92
HERC1-211ENST00000560983 REP15Q6BDI9 236 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 CYP20A1Q6UW02 462 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 C16orf89Q6UX73 402 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 FRRS1Q6ZNA5 592 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 IKBIPQ70UQ0 350 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 TUBA1AQ71U36 451 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 C1orf174Q8IYL3 243 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 ATP6V1C2Q8NEY4 427 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 OR7G2Q8NG99 324 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 OR4C3Q8NH37 302 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 HUS1BQ8NHY5 278 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 ADAMTS16Q8TE57 1224 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 ZFP90Q8TF47 636 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 BCL2L2Q92843 193 aaPredicted RBP3.07□□□□□ -1.92
HERC1-211ENST00000560983 ESAMQ96AP7 390 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 CNRIP1Q96F85 164 aaPredicted RBP3.07□□□□□ -1.92
HERC1-211ENST00000560983 MED30Q96HR3 178 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 NAP1L5Q96NT1 182 aaPredicted RBP3.07□□□□□ -1.92
HERC1-211ENST00000560983 SERPINB12Q96P63 405 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 GPR78Q96P69 363 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 ZNF347Q96SE7 839 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 KCNS3Q9BQ31 491 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 EFCAB11Q9BUY7 163 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 SF3B5Q9BWJ5 86 aaKnown RBP3.07□□□□□ -1.92
HERC1-211ENST00000560983 NUP62CLQ9H1M0 184 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 WDR41Q9HAD4 459 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 OBP2BQ9NPH6 170 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 TAS2R13Q9NYV9 303 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 BFARQ9NZS9 450 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 MDFICQ9P1T7 246 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 FBXO5Q9UKT4 447 aa3.07□□□□□ -1.92
HERC1-211ENST00000560983 CMAHPQ9Y471 501 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms