RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 EPCAMP16422 314 aa15.05■□□□□ -0
TPM1-228ENST00000560975 SPI1P17947 270 aa15.05■□□□□ -0
TPM1-228ENST00000560975 SNRPEP62304 92 aaKnown RBP15.05■□□□□ -0
TPM1-228ENST00000560975 PLAURQ03405 335 aa15.05■□□□□ -0
TPM1-228ENST00000560975 PDZK1IP1Q13113 114 aa15.05■□□□□ -0
TPM1-228ENST00000560975 OR7A5Q15622 319 aa15.05■□□□□ -0
TPM1-228ENST00000560975 PRRT3Q5FWE3 981 aa15.05■□□□□ -0
TPM1-228ENST00000560975 AVPI1Q5T686 147 aa15.05■□□□□ -0
TPM1-228ENST00000560975 ZCCHC12Q6PEW1 402 aa15.05■□□□□ -0
TPM1-228ENST00000560975 RBMS3Q6XE24 437 aaKnown RBP15.05■□□□□ -0
TPM1-228ENST00000560975 ZAR1Q86SH2 424 aa15.05■□□□□ -0
TPM1-228ENST00000560975 ZNF227Q86WZ6 799 aa15.05■□□□□ -0
TPM1-228ENST00000560975 TMIEQ8NEW7 156 aa15.05■□□□□ -0
TPM1-228ENST00000560975 TSSK2Q96PF2 358 aa15.05■□□□□ -0
TPM1-228ENST00000560975 ZNF350Q9GZX5 532 aa15.05■□□□□ -0
TPM1-228ENST00000560975 TAS2R8Q9NYW2 309 aa15.05■□□□□ -0
TPM1-228ENST00000560975 DNAH14Q0VDD8 3507 aa15.04■□□□□ -0
TPM1-228ENST00000560975 LOC100509620A0A075B734 347 aa15.04■□□□□ -0
TPM1-228ENST00000560975 TMEM72A0PK05 275 aa15.04■□□□□ -0
TPM1-228ENST00000560975 RNF222A6NCQ9 220 aa15.04■□□□□ -0
TPM1-228ENST00000560975 TGM5O43548 720 aa15.04■□□□□ -0
TPM1-228ENST00000560975 PRSS3P35030 304 aa15.04■□□□□ -0
TPM1-228ENST00000560975 ZNF234Q14588 700 aa15.04■□□□□ -0
TPM1-228ENST00000560975 DEFB115Q30KQ5 88 aa15.04■□□□□ -0
TPM1-228ENST00000560975 PLEKHN1Q494U1 663 aaPredicted RBP15.04■□□□□ -0
TPM1-228ENST00000560975 SCGB2B2Q4G0G5 96 aa15.04■□□□□ -0
TPM1-228ENST00000560975 C11orf87Q6NUJ2 197 aa15.04■□□□□ -0
TPM1-228ENST00000560975 LRRTM1Q86UE6 522 aa15.04■□□□□ -0
TPM1-228ENST00000560975 OR51A4Q8NGJ6 313 aa15.04■□□□□ -0
TPM1-228ENST00000560975 ZDHHC4Q9NPG8 344 aa15.04■□□□□ -0
TPM1-228ENST00000560975 ARID1BQ8NFD5 2236 aaPredicted RBP15.04■□□□□ -0
TPM1-228ENST00000560975 OR52A4PA6NMU1 304 aa15.04■□□□□ -0
TPM1-228ENST00000560975 PMS2P2O95744 297 aa15.04■□□□□ -0
TPM1-228ENST00000560975 AGR2O95994 175 aa15.04■□□□□ -0
TPM1-228ENST00000560975 ITGB8P26012 769 aa15.04■□□□□ -0
TPM1-228ENST00000560975 CSF2RBP32927 897 aa15.04■□□□□ -0
TPM1-228ENST00000560975 PSMD4P55036 377 aaKnown RBP15.04■□□□□ -0
TPM1-228ENST00000560975 MICBQ29980 383 aa15.04■□□□□ -0
TPM1-228ENST00000560975 AKIRIN2Q53H80 203 aa15.04■□□□□ -0
TPM1-228ENST00000560975 DHRS7BQ6IAN0 325 aaPredicted RBP15.04■□□□□ -0
TPM1-228ENST00000560975 UQCC3Q6UW78 93 aa15.04■□□□□ -0
TPM1-228ENST00000560975 ARMC10Q8N2F6 343 aa15.04■□□□□ -0
TPM1-228ENST00000560975 RAB42Q8N4Z0 105 aa15.04■□□□□ -0
TPM1-228ENST00000560975 ZCCHC10Q8TBK6 192 aa15.04■□□□□ -0
TPM1-228ENST00000560975 PPP1R1CQ8WVI7 109 aa15.04■□□□□ -0
TPM1-228ENST00000560975 RNF166Q96A37 237 aaPredicted RBP15.04■□□□□ -0
TPM1-228ENST00000560975 TINAGL1Q9GZM7 467 aaPredicted RBP15.04■□□□□ -0
TPM1-228ENST00000560975 GAREM1Q9H706 876 aa15.04■□□□□ -0
TPM1-228ENST00000560975 SERTAD3Q9UJW9 196 aa15.04■□□□□ -0
TPM1-228ENST00000560975 KLHDC2Q9Y2U9 406 aa15.04■□□□□ -0
TPM1-228ENST00000560975 OR2F2O95006 317 aa15.03■□□□□ -0
TPM1-228ENST00000560975 CD1AP06126 327 aa15.03■□□□□ -0
TPM1-228ENST00000560975 CD34P28906 385 aa15.03■□□□□ -0
TPM1-228ENST00000560975 MNDAP41218 407 aa15.03■□□□□ -0
TPM1-228ENST00000560975 PTGFRP43088 359 aa15.03■□□□□ -0
TPM1-228ENST00000560975 VASPP50552 380 aaPredicted RBP15.03■□□□□ -0
TPM1-228ENST00000560975 CAPZA1P52907 286 aa15.03■□□□□ -0
TPM1-228ENST00000560975 CAP1Q01518 475 aa15.03■□□□□ -0
TPM1-228ENST00000560975 MESP2Q0VG99 397 aa15.03■□□□□ -0
TPM1-228ENST00000560975 OR2F1Q13607 317 aa15.03■□□□□ -0
TPM1-228ENST00000560975 GAS6Q14393 721 aa15.03■□□□□ -0
TPM1-228ENST00000560975 TCEA2Q15560 299 aa15.03■□□□□ -0
TPM1-228ENST00000560975 ALG10BQ5I7T1 473 aa15.03■□□□□ -0
TPM1-228ENST00000560975 DNM1P46Q6ZS02 220 aa15.03■□□□□ -0
TPM1-228ENST00000560975 CCDC107Q8WV48 283 aa15.03■□□□□ -0
TPM1-228ENST00000560975 C14orf105Q9NVL8 296 aa15.03■□□□□ -0
TPM1-228ENST00000560975 SPHK1Q9NYA1 384 aa15.03■□□□□ -0
TPM1-228ENST00000560975 MYEF2Q9P2K5 600 aaKnown RBP15.03■□□□□ -0
TPM1-228ENST00000560975 KCNK6Q9Y257 313 aa15.03■□□□□ -0
TPM1-228ENST00000560975 FARSAQ9Y285 508 aaKnown RBP15.03■□□□□ -0
TPM1-228ENST00000560975 TO15178 435 aa15.03■□□□□ -0
TPM1-228ENST00000560975 OR2T1O43869 369 aa15.03■□□□□ -0
TPM1-228ENST00000560975 NDUFB2O95178 105 aa15.03■□□□□ -0
TPM1-228ENST00000560975 AMY2AP04746 511 aa15.03■□□□□ -0
TPM1-228ENST00000560975 RPS27P42677 84 aaKnown RBP15.03■□□□□ -0
TPM1-228ENST00000560975 RAB28P51157 221 aa15.03■□□□□ -0
TPM1-228ENST00000560975 GGTLC2Q14390 218 aa15.03■□□□□ -0
TPM1-228ENST00000560975 NR0B2Q15466 257 aa15.03■□□□□ -0
TPM1-228ENST00000560975 LIPNQ5VXI9 398 aa15.03■□□□□ -0
TPM1-228ENST00000560975 GABRG1Q8N1C3 465 aa15.03■□□□□ -0
TPM1-228ENST00000560975 GTPBP8Q8N3Z3 284 aaPredicted RBP15.03■□□□□ -0
TPM1-228ENST00000560975 GALNT16Q8N428 558 aa15.03■□□□□ -0
TPM1-228ENST00000560975 MRI1Q9BV20 369 aa15.03■□□□□ -0
TPM1-228ENST00000560975 ZFP57Q9NU63 452 aa15.03■□□□□ -0
TPM1-228ENST00000560975 FRRS1LQ9P0K9 344 aa15.03■□□□□ -0
TPM1-228ENST00000560975 IKZF2Q9UKS7 526 aa15.03■□□□□ -0
TPM1-228ENST00000560975 HCFC2Q9Y5Z7 792 aa15.03■□□□□ -0
TPM1-228ENST00000560975 RAB19A4D1S5 217 aa15.03■□□□□ -0
TPM1-228ENST00000560975 RNGTTO60942 597 aaKnown RBP15.03■□□□□ -0
TPM1-228ENST00000560975 FARS2O95363 451 aaKnown RBP15.03■□□□□ -0
TPM1-228ENST00000560975 RAB3DO95716 219 aa15.03■□□□□ -0
TPM1-228ENST00000560975 ZNF888P0CJ79 500 aaPredicted RBP15.03■□□□□ -0
TPM1-228ENST00000560975 ADRB3P13945 408 aa15.03■□□□□ -0
TPM1-228ENST00000560975 POU3F4P49335 361 aa15.03■□□□□ -0
TPM1-228ENST00000560975 EXOSC7Q15024 291 aaKnown RBP15.03■□□□□ -0
TPM1-228ENST00000560975 CEBPEQ15744 281 aa15.03■□□□□ -0
TPM1-228ENST00000560975 ANKRD16Q6P6B7 361 aa15.03■□□□□ -0
TPM1-228ENST00000560975 TMEFF1Q8IYR6 380 aa15.03■□□□□ -0
TPM1-228ENST00000560975 NPEPL1Q8NDH3 523 aa15.03■□□□□ -0
TPM1-228ENST00000560975 OR5M8Q8NGP6 311 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms