RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 ALDH3B1P43353 468 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 IDH2P48735 452 aaKnown RBP8.49□□□□□ -1.05
TPM1-225ENST00000560679 POLR2HP52434 150 aaKnown RBP8.49□□□□□ -1.05
TPM1-225ENST00000560679 NME5P56597 212 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 HBA1P69905 142 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 MYBPC1Q00872 1141 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 ZP4Q12836 540 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 TRAP1Q12931 704 aaKnown RBP8.49□□□□□ -1.05
TPM1-225ENST00000560679 NPRL3Q12980 569 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 DAG1Q14118 895 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 PTGR1Q14914 329 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 SMU1Q2TAY7 513 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 C6orf136Q5SQH8 315 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 TYW3Q6IPR3 259 aaKnown RBP8.49□□□□□ -1.05
TPM1-225ENST00000560679 BLOC1S3Q6QNY0 202 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 FRRS1Q6ZNA5 592 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 GPAT4Q86UL3 456 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 MDP1Q86V88 176 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 RETREG3Q86VR2 466 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 LRP11Q86VZ4 500 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 BPIFB2Q8N4F0 458 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 TEX29Q8N6K0 151 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 HIPK4Q8NE63 616 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 OR4M2Q8NGB6 313 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 CNOT9Q92600 299 aaKnown RBP8.49□□□□□ -1.05
TPM1-225ENST00000560679 RDH5Q92781 318 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 DVL3Q92997 716 aaPredicted RBP8.49□□□□□ -1.05
TPM1-225ENST00000560679 LRRC58Q96CX6 371 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 DDIT4LQ96D03 193 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 ZG16BQ96DA0 208 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 ASB9Q96DX5 294 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 DUX5Q96PT3 197 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 ZNF184Q99676 751 aaPredicted RBP8.49□□□□□ -1.05
TPM1-225ENST00000560679 SYT3Q9BQG1 590 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 SF3B5Q9BWJ5 86 aaKnown RBP8.49□□□□□ -1.05
TPM1-225ENST00000560679 ZNF665Q9H7R5 613 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 EXOSC3Q9NQT5 275 aaKnown RBP8.49□□□□□ -1.05
TPM1-225ENST00000560679 GID8Q9NWU2 228 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 REV1Q9UBZ9 1251 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 LRCH1Q9Y2L9 728 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 TMED5Q9Y3A6 229 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 CMAHPQ9Y471 501 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 DNAJC9-AS1A6NH13 148 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 TMEM229AB2RXF0 380 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 FXYD1O00168 92 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 CASQ2O14958 399 aaPredicted RBP8.48□□□□□ -1.05
TPM1-225ENST00000560679 PPIHO43447 177 aaKnown RBP8.48□□□□□ -1.05
TPM1-225ENST00000560679 PLPP2O43688 288 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 SLC22A3O75751 556 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 KRT33AO76009 404 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 MPZL1O95297 269 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 GSNP06396 782 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 TACR3P29371 465 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 EVX1P49640 407 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 SLC7A2P52569 658 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 SH3BGRP55822 239 aaPredicted RBP8.48□□□□□ -1.05
TPM1-225ENST00000560679 MRPS11P82912 194 aaKnown RBP8.48□□□□□ -1.05
TPM1-225ENST00000560679 ROR2Q01974 943 aaKnown RBP8.48□□□□□ -1.05
TPM1-225ENST00000560679 EMX2Q04743 252 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 OR7A5Q15622 319 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 OCLNQ16625 522 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 SPATS1Q496A3 300 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 NIPAL3Q6P499 406 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 IZUMO2Q6UXV1 221 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 CREB3L2Q70SY1 520 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 EPHX4Q8IUS5 362 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 PQLC1Q8N2U9 271 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 KRTCAP2Q8N6L1 136 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 RNF148Q8N7C7 305 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 SIGLECL1Q8N7X8 197 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 FNDC5Q8NAU1 212 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 BHLHE22Q8NFJ8 381 aaPredicted RBP8.48□□□□□ -1.05
TPM1-225ENST00000560679 MOAP1Q96BY2 351 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 SPDL1Q96EA4 605 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 ZNF837Q96EG3 531 aaPredicted RBP8.48□□□□□ -1.05
TPM1-225ENST00000560679 SLC35G5Q96KT7 338 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 PPP3R2Q96LZ3 170 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 HOPXQ9BPY8 73 aaPredicted RBP8.48□□□□□ -1.05
TPM1-225ENST00000560679 C1orf50Q9BV19 199 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 PIF1Q9H611 641 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 MOV10Q9HCE1 1003 aaKnown RBP8.48□□□□□ -1.05
TPM1-225ENST00000560679 SLC52A3Q9NQ40 469 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 DDX28Q9NUL7 540 aaKnown RBP8.48□□□□□ -1.05
TPM1-225ENST00000560679 ABCD2Q9UBJ2 740 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 CD300AQ9UGN4 299 aa8.48□□□□□ -1.05
TPM1-225ENST00000560679 ARHGAP32A7KAX9 2087 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 RNF103-CHMP3A0A140T963 221 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 PRSS51A0A1B0GVH4 220 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 PRAMEF27A3QJZ7 478 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 RPL36A-HNRNPH2H7BZ11 118 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 J3QLI3 93 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 FRS3O43559 492 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 SEC14L2O76054 403 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 IGHV2-5P01817 119 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 GUSBP08236 651 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 HOXB1P14653 301 aaPredicted RBP8.47□□□□□ -1.05
TPM1-225ENST00000560679 MATN1P21941 496 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 NR4A1P22736 598 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 PRTN3P24158 256 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 HTR3AP46098 478 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms