RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 SLC46A3Q7Z3Q1 461 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 YTHDF3Q7Z739 585 aaKnown RBP11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 C20orf196Q8IYI0 205 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 CDK20Q8IZL9 346 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 FBXL14Q8N1E6 418 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 LRRC75A-AS1Q8N1F1 130 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 FAM156AQ8NDB6 213 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 ZNF566Q969W8 418 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 BPIFA2Q96DR5 249 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 ZNF837Q96EG3 531 aaPredicted RBP11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 TRMT61AQ96FX7 289 aaKnown RBP11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 LRR1Q96L50 414 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 ADAD1Q96M93 576 aaKnown RBP11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 NDE1Q9NXR1 346 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 MOKQ9UQ07 419 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 FAM32AQ9Y421 112 aaKnown RBP11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 V9GYQ6 96 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 F8P00451 2351 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 MAP1AP78559 2803 aaPredicted RBP11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 ATP6V1G2-DDX39BF2Z307 99 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 CRYAAP02489 173 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 CD79AP11912 226 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 CDKN1AP38936 164 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 FABP6P51161 128 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 MNAT1P51948 309 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 ATP5J2P56134 94 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 CLRN1P58418 232 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 RPL18Q07020 188 aaKnown RBP11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 ZP4Q12836 540 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 SAMD4BQ5PRF9 694 aaKnown RBP11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 AGAP6Q5VW22 663 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 ZNF730Q6ZMV8 503 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 ZNF813Q6ZN06 617 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 OFCC1Q8IZS5 231 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 PGAM4Q8N0Y7 254 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 OR6X1Q8NH79 312 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 Q96MF0 132 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 SLC38A2Q96QD8 506 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 CDRT15Q96T59 188 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 GSX2Q9BZM3 304 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 MOV10Q9HCE1 1003 aaKnown RBP11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 INIPQ9NRY2 104 aa11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 SAMD4AQ9UPU9 718 aaKnown RBP11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 HEATR1Q9H583 2144 aaKnown RBP11.33□□□□□ -0.6
CTDSPL2-209ENST00000560620 ITPR3Q14573 2671 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 MED13LQ71F56 2210 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 ARPC4-TTLL3A0A0A6YYG9 625 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 IGHV1-18A0A0C4DH31 117 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 TMCC2O75069 709 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 FAM107AO95990 144 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 DANCRP0C864 163 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 HOXB1P14653 301 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 B4GALT1P15291 398 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 PAX7P23759 505 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 MSX2P35548 267 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 AQP2P41181 271 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 KRT72Q14CN4 511 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 LAPTM4AQ15012 233 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 PGGHGQ32M88 737 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 FGD3Q5JSP0 725 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 MEX3DQ86XN8 651 aaKnown RBP11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 NRMQ8IXM6 262 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 DEFB107AQ8IZN7 70 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 ANKS4BQ8N8V4 417 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 CCDC197Q8NCU1 140 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 RBM15BQ8NDT2 890 aaKnown RBP11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 MAGEE2Q8TD90 523 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 SLC25A44Q96H78 314 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 BOD1Q96IK1 185 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 FOXB1Q99853 325 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 DHRS9Q9BPW9 319 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 TMUB1Q9BVT8 246 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 GLTPQ9NZD2 209 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 MAGEL2Q9UJ55 1249 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 CADP27708 2225 aa11.32□□□□□ -0.6
CTDSPL2-209ENST00000560620 HIVEP1P15822 2718 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 E7EQL1 145 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 hCG_2039718K7EN88 272 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 FFAR1O14842 300 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 IGF2P01344 180 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 IGHG1P01857 330 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 DAP3P51398 398 aaKnown RBP11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 IDH3GP51553 393 aaPredicted RBP11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 MYBPC1Q00872 1141 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 PIGFQ07326 219 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 TOP3AQ13472 1001 aaPredicted RBP11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 ALG10Q5BKT4 473 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 VHLLQ6RSH7 139 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 HDDC2Q7Z4H3 204 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 OAFQ86UD1 273 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 WDFY1Q8IWB7 410 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 CCDC36Q8IYA8 594 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 MUC15Q8N387 334 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 FITM2Q8N6M3 262 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 SYT14Q8NB59 555 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 OR51A7Q8NH64 312 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 MOSPD2Q8NHP6 518 aa11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 ACOT11Q8WXI4 607 aaPredicted RBP11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 NANOS1Q8WY41 292 aaKnown RBP11.31□□□□□ -0.6
CTDSPL2-209ENST00000560620 NELFAQ9H3P2 528 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms