RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ARFIP2P53365 341 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 GALK2Q01415 458 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 LGALS3BPQ08380 585 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 NPRL3Q12980 569 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 TMEM249Q2WGJ8 235 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 CHRFAM7AQ494W8 412 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 CARD17Q5XLA6 110 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 CYB5R2Q6BCY4 276 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 UGT2A3Q6UWM9 527 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 ZNF813Q6ZN06 617 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 CCDC80Q76M96 950 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 PIWIL3Q7Z3Z3 882 aaKnown RBP12.24□□□□□ -0.45
TPM1-223ENST00000560445 NANOGNBQ7Z5D8 188 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 ARPINQ7Z6K5 226 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 C10orf111Q8N326 155 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 OR6T1Q8NGN1 323 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 OR10A6Q8NH74 314 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 OR6X1Q8NH79 312 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 ADAMTS16Q8TE57 1224 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 VRK1Q99986 396 aaPredicted RBP12.24□□□□□ -0.45
TPM1-223ENST00000560445 TMEM120AQ9BXJ8 343 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 C1orf198Q9H425 327 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 PLK3Q9H4B4 646 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 TMEM160Q9NX00 188 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 SEC14L4Q9UDX3 406 aa12.24□□□□□ -0.45
TPM1-223ENST00000560445 CPSF4LA6NMK7 179 aaKnown RBP12.23□□□□□ -0.45
TPM1-223ENST00000560445 CENPBD1B2RD01 187 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 MS4A18H0YCH9 400 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 RNF13O43567 381 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 PTHP01270 115 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 IGF2P01344 180 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 OPN1SWP03999 348 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 UMPSP11172 480 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 CD79AP11912 226 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 HNF1AP20823 631 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 DAP3P51398 398 aaKnown RBP12.23□□□□□ -0.45
TPM1-223ENST00000560445 KRTAP1-1Q07627 177 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 ZP4Q12836 540 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 DAG1Q14118 895 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 ADIPOQQ15848 244 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 ZNF74Q16587 644 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 DUSP7Q16829 419 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 MS4A18Q3C1V0 323 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 VHLLQ6RSH7 139 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 LINC00114Q6XXX2 140 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 LINGO2Q7L985 606 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 RETREG3Q86VR2 466 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 COMTD1Q86VU5 262 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 HIPK1Q86Z02 1210 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 MAPK1IP1LQ8NDC0 245 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 VANGL1Q8TAA9 524 aaPredicted RBP12.23□□□□□ -0.45
TPM1-223ENST00000560445 LZICQ8WZA0 190 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 ZNF566Q969W8 418 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 LRRC58Q96CX6 371 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 MOGAT1Q96PD6 335 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 FOXB1Q99853 325 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 NELFAQ9H3P2 528 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 GPR160Q9UJ42 338 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 SLC7A7Q9UM01 511 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 CMAHPQ9Y471 501 aa12.23□□□□□ -0.45
TPM1-223ENST00000560445 IGHV2OR16-5A0A0B4J2B6 119 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 A0A1W2PRG6 482 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 SLC22A23A1A5C7 686 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 hCG_2039718K7EN88 272 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 NDUFAB1O14561 156 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 MRASO14807 208 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 SERPINI2O75830 405 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 IGHG1P01857 330 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 EVX1P49640 407 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 BIDP55957 195 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 TAS2R41P59536 307 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 SELENOVP59797 346 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 TUBA1BP68363 451 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 TUBA4AP68366 448 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 LSM11P83369 360 aaKnown RBP eCLIP12.22□□□□□ -0.45
TPM1-223ENST00000560445 NRN1LQ496H8 165 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 C6orf52Q5T4I8 152 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 GKAP1Q5VSY0 366 aaPredicted RBP12.22□□□□□ -0.45
TPM1-223ENST00000560445 NANOGP8Q6NSW7 305 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 TUBA1AQ71U36 451 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 SLC35D2Q76EJ3 337 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 MDP1Q86V88 176 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 TAMM41Q96BW9 452 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 SLC25A44Q96H78 314 aaPredicted RBP12.22□□□□□ -0.45
TPM1-223ENST00000560445 PRR14Q9BWN1 585 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 NANOGQ9H9S0 305 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 MED4Q9NPJ6 270 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 MED29Q9NX70 200 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 ARFGEF3Q5TH69 2177 aa12.22□□□□□ -0.45
TPM1-223ENST00000560445 ALPK2Q86TB3 2170 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 MCIDASD6RGH6 385 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 C11orf98E9PRG8 122 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 TPST2O60704 377 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 OR5F1O95221 314 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 CH25HO95992 272 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 BCL10O95999 233 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 HPRP00739 348 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 OR8G3PP0DMU2 310 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 IFNGR1P15260 489 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 ZNF84P51523 738 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms