RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 APH1BQ8WW43 257 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 ASB10Q8WXI3 467 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 HDAC2Q92769 488 aaKnown RBP8.32□□□□□ -1.08
HERC1-206ENST00000559996 RASD2Q96D21 266 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 ERMAPQ96PL5 475 aaPredicted RBP8.32□□□□□ -1.08
HERC1-206ENST00000559996 TRIB1Q96RU8 372 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 DMRTA2Q96SC8 542 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 ZNF184Q99676 751 aaPredicted RBP8.32□□□□□ -1.08
HERC1-206ENST00000559996 TTYH2Q9BSA4 534 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 TACO1Q9BSH4 297 aaKnown RBP8.32□□□□□ -1.08
HERC1-206ENST00000559996 EMC6Q9BV81 110 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 IFT27Q9BW83 186 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 HCAR1Q9BXC0 346 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 NMNAT2Q9BZQ4 307 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 TIGARQ9NQ88 270 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 TBC1D23Q9NUY8 699 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 UBAP1Q9NZ09 502 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 FOXD3Q9UJU5 478 aaPredicted RBP8.32□□□□□ -1.08
HERC1-206ENST00000559996 TINAGQ9UJW2 476 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 RNF6Q9Y252 685 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 NOX1Q9Y5S8 564 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 FREM1Q5H8C1 2179 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 PHF3Q92576 2039 aaKnown RBP8.32□□□□□ -1.08
HERC1-206ENST00000559996 TEX13CA0A0J9YWL9 993 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 SLC35F4A4IF30 521 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 OR6C68A6NDL8 312 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 SLC22A20A6NK97 555 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 DCTN6O00399 190 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 IDH3BO43837 385 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 SS18L1O75177 396 aaPredicted RBP8.31□□□□□ -1.08
HERC1-206ENST00000559996 WBP4O75554 376 aaKnown RBP8.31□□□□□ -1.08
HERC1-206ENST00000559996 TRMUO75648 421 aaKnown RBP8.31□□□□□ -1.08
HERC1-206ENST00000559996 TNFSF13O75888 250 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 SYNGR4O95473 234 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 CGAP01215 116 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 YES1P07947 543 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 STSP08842 583 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 HOXD4P09016 255 aaPredicted RBP8.31□□□□□ -1.08
HERC1-206ENST00000559996 GLI4P10075 376 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 GABRA1P14867 456 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 ZNF43P17038 809 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 ACVR2AP27037 513 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 NOS3P29474 1203 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 SDHAP31040 664 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 TIMP3P35625 211 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 ZNF133P52736 654 aaPredicted RBP8.31□□□□□ -1.08
HERC1-206ENST00000559996 SMSP52788 366 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 POU3F1Q03052 451 aaPredicted RBP8.31□□□□□ -1.08
HERC1-206ENST00000559996 MRPL49Q13405 166 aaKnown RBP8.31□□□□□ -1.08
HERC1-206ENST00000559996 TAF11Q15544 211 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 IGFBP7Q16270 282 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 SLC25A30Q5SVS4 291 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 C1orf185Q5T7R7 199 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 TTC23Q5W5X9 447 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 LRFN4Q6PJG9 635 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 NCCRP1Q6ZVX7 275 aaPredicted RBP8.31□□□□□ -1.08
HERC1-206ENST00000559996 LINGO2Q7L985 606 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 BCDIN3DQ7Z5W3 292 aaKnown RBP8.31□□□□□ -1.08
HERC1-206ENST00000559996 GPAT4Q86UL3 456 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 UEVLDQ8IX04 471 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 FAM26EQ8N5C1 309 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 SLC37A3Q8NCC5 494 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 OR4K13Q8NH42 304 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 OR6X1Q8NH79 312 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 TEX47Q8TBZ9 253 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 TMEM45BQ96B21 275 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 OR2M2Q96R28 347 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 POLDIP3Q9BY77 421 aaKnown RBP8.31□□□□□ -1.08
HERC1-206ENST00000559996 ANKRD60Q9BZ19 345 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 VCX3BQ9H321 246 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 CMC2Q9NRP2 79 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 TVP23BQ9NYZ1 205 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 MCTS1Q9ULC4 181 aaKnown RBP8.31□□□□□ -1.08
HERC1-206ENST00000559996 RAB26Q9ULW5 256 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 CLEC4AQ9UMR7 237 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 BAIAP2Q9UQB8 552 aa8.31□□□□□ -1.08
HERC1-206ENST00000559996 SPTA1P02549 2419 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 KALRNO60229 2985 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 B8ZZF3 427 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 SERPINI2O75830 405 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 OR6A2O95222 327 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 BCL10O95999 233 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 PGA4P0DJD7 388 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 PGA3P0DJD8 388 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 ACADSP16219 412 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 ABOP16442 354 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 CDH2P19022 906 aaPredicted RBP8.3□□□□□ -1.08
HERC1-206ENST00000559996 SLC2A5P22732 501 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 MYF6P23409 242 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 GTF2E2P29084 291 aaKnown RBP8.3□□□□□ -1.08
HERC1-206ENST00000559996 PTGER4P35408 488 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 RPL4P36578 427 aaKnown RBP8.3□□□□□ -1.08
HERC1-206ENST00000559996 ACVR1BP36896 505 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 SELENOPP49908 381 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 RPS6KA3P51812 740 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 BIDP55957 195 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 CLDN17P56750 224 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 SNRPGP62308 76 aaKnown RBP8.3□□□□□ -1.08
HERC1-206ENST00000559996 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.3□□□□□ -1.08
HERC1-206ENST00000559996 LGALS3BPQ08380 585 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms