RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 C1DQ13901 141 aaKnown RBP10.87□□□□□ -0.67
HERC1-205ENST00000559886 MELKQ14680 651 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 FAM205BPQ63HN1 556 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 NIPAL3Q6P499 406 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 ZNF540Q8NDQ6 660 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 TSPAN14Q8NG11 270 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 ZPLD1Q8TCW7 415 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 SGCDQ92629 289 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 GGHQ92820 318 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 RHNO1Q9BSD3 238 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 MED29Q9NX70 200 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 KLHL13Q9P2N7 655 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.87□□□□□ -0.67
HERC1-205ENST00000559886 TPRP12270 2363 aaKnown RBP10.87□□□□□ -0.67
HERC1-205ENST00000559886 ACACBO00763 2458 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 PRSS37A4D1T9 235 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 ARHGEF9O43307 516 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 DBTP11182 482 aaKnown RBP10.86□□□□□ -0.67
HERC1-205ENST00000559886 EEF1B2P24534 225 aaKnown RBP10.86□□□□□ -0.67
HERC1-205ENST00000559886 HTR1FP30939 366 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 CDH11P55287 796 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 CDH15P55291 814 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 ZNF91Q05481 1191 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 RUNX1T1Q06455 604 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 C3AR1Q16581 482 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 ABLIM2Q6H8Q1 611 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 CREB3L2Q70SY1 520 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 OR9K2Q8NGE7 335 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 IPCEF1Q8WWN9 437 aaPredicted RBP10.86□□□□□ -0.67
HERC1-205ENST00000559886 ROBO4Q8WZ75 1007 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 PRDM14Q9GZV8 571 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 CNOT2Q9NZN8 540 aaKnown RBP10.86□□□□□ -0.67
HERC1-205ENST00000559886 ZMIZ1Q9ULJ6 1067 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 ZNF716A6NP11 495 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 CYTIPO60759 359 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 SMIM18P0DKX4 95 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 CLUP10909 449 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 SLC25A1P53007 311 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 BIDP55957 195 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 FAM180AQ6UWF9 173 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 MEPCEQ7L2J0 689 aaKnown RBP10.86□□□□□ -0.67
HERC1-205ENST00000559886 FCRLAQ7L513 359 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 WDFY1Q8IWB7 410 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 GHDCQ8N2G8 530 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 EXD3Q8N9H8 876 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 OR9Q1Q8NGQ5 310 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 SARAFQ96BY9 339 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 MRPS18AQ9NVS2 196 aaKnown RBP10.86□□□□□ -0.67
HERC1-205ENST00000559886 VSX1Q9NZR4 365 aaPredicted RBP10.86□□□□□ -0.67
HERC1-205ENST00000559886 CAMK2AQ9UQM7 478 aa10.86□□□□□ -0.67
HERC1-205ENST00000559886 EFCAB10A6NFE3 127 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 NPIPA2E9PIF3 369 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 NPIPA3F8WFD2 350 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 H7C1C5 153 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 SYNGR4O95473 234 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 RENP00797 406 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 HTR1AP08908 422 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 PIPP12273 146 aaPredicted RBP10.85□□□□□ -0.67
HERC1-205ENST00000559886 MTNR1AP48039 350 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 SLC16A1P53985 500 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 LCN6P62502 163 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 DBPQ10586 325 aaPredicted RBP10.85□□□□□ -0.67
HERC1-205ENST00000559886 APOFQ13790 326 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 ZNF324BQ6AW86 544 aaPredicted RBP10.85□□□□□ -0.67
HERC1-205ENST00000559886 AHSA2Q719I0 299 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 CHMP1BQ7LBR1 199 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 HDDC2Q7Z4H3 204 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 OR6X1Q8NH79 312 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 GPR137Q96N19 417 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 SIGLEC11Q96RL6 698 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 KCNK17Q96T54 332 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 TEAD3Q99594 435 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 COPS4Q9BT78 406 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 EMC6Q9BV81 110 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 OR51V1Q9H2C8 321 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 CCNB1IP1Q9NPC3 277 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 RPRD1BQ9NQG5 326 aaKnown RBP10.85□□□□□ -0.67
HERC1-205ENST00000559886 ASB6Q9NWX5 421 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 SCOCQ9UIL1 159 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 MCTS1Q9ULC4 181 aaKnown RBP10.85□□□□□ -0.67
HERC1-205ENST00000559886 A0A087WXM4 84 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 A0A1B0GTH9 108 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 SLC22A23A1A5C7 686 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 SLC35F4A4IF30 521 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 OR14I1A6ND48 311 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 CCDC182A6NF36 153 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 SLC22A31A6NKX4 558 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 AHCYL1O43865 530 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 TRMUO75648 421 aaKnown RBP10.85□□□□□ -0.67
HERC1-205ENST00000559886 GYPBP06028 91 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 SPI1P17947 270 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 TMED1Q13445 227 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 PON3Q15166 354 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 KLHL12Q53G59 568 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 EEF1A1P5Q5VTE0 462 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 ZNF773Q6PK81 442 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 PM20D2Q8IYS1 436 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 ZIC4Q8N9L1 334 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 RNF128Q8TEB7 428 aa10.85□□□□□ -0.67
HERC1-205ENST00000559886 KISS1RQ969F8 398 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms