RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 ZP4Q12836 540 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 NPRL3Q12980 569 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 CAMK2DQ13557 499 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 TRAM2Q15035 370 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 ETFDHQ16134 617 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 GSG1Q2KHT4 349 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 CEACAM16Q2WEN9 425 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 MS4A18Q3C1V0 323 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 C3orf36Q3SXR2 165 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 TBRG1Q3YBR2 411 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 ANKDD1AQ495B1 522 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 HIKESHIQ53FT3 197 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 ALG10Q5BKT4 473 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 ZNF544Q6NX49 715 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 C8orf82Q6P1X6 216 aaPredicted RBP3.83□□□□□ -1.8
SNX1-205ENST00000559339 PRSS57Q6UWY2 283 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 WDR88Q6ZMY6 472 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 CBLL1Q75N03 491 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 SLC35D2Q76EJ3 337 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 PIWIL3Q7Z3Z3 882 aaKnown RBP3.83□□□□□ -1.8
SNX1-205ENST00000559339 VTCN1Q7Z7D3 282 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 OAFQ86UD1 273 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 TGIF2LYQ8IUE0 185 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 NKAIN4Q8IVV8 208 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 C20orf196Q8IYI0 205 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 OFCC1Q8IZS5 231 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 TMEM123Q8N131 208 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 FBXL14Q8N1E6 418 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 ARHGAP24Q8N264 748 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 MUC15Q8N387 334 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 LRRC17Q8N6Y2 441 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 FAM169BQ8N8A8 192 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 CCDC197Q8NCU1 140 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 IL17RDQ8NFM7 739 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 KBTBD8Q8NFY9 601 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 OR4D11Q8NGI4 311 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 OR1K1Q8NGR3 316 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 FNDC8Q8TC99 324 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 MAGEE2Q8TD90 523 aaPredicted RBP3.83□□□□□ -1.8
SNX1-205ENST00000559339 ACOT11Q8WXI4 607 aaPredicted RBP3.83□□□□□ -1.8
SNX1-205ENST00000559339 BPIFA2Q96DR5 249 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 PERPQ96FX8 193 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 SLC25A44Q96H78 314 aaPredicted RBP3.83□□□□□ -1.8
SNX1-205ENST00000559339 HSH2DQ96JZ2 352 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 NSMCE2Q96MF7 247 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 SLC38A2Q96QD8 506 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 OR2M2Q96R28 347 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 CDRT15Q96T59 188 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 TMEM204Q9BSN7 226 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 BDH2Q9BUT1 245 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 KATNB1Q9BVA0 655 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 GSX2Q9BZM3 304 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 KCNN2Q9H2S1 579 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 ANKRD19PQ9H560 264 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 DENND2DQ9H6A0 471 aaPredicted RBP3.83□□□□□ -1.8
SNX1-205ENST00000559339 GORASP2Q9H8Y8 452 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 NMNAT1Q9HAN9 279 aaPredicted RBP3.83□□□□□ -1.8
SNX1-205ENST00000559339 GPR35Q9HC97 309 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 MEPEQ9NQ76 525 aaPredicted RBP3.83□□□□□ -1.8
SNX1-205ENST00000559339 INIPQ9NRY2 104 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 DCAF13Q9NV06 445 aaKnown RBP3.83□□□□□ -1.8
SNX1-205ENST00000559339 MED29Q9NX70 200 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 TAS2R5Q9NYW4 299 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 GLTPQ9NZD2 209 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 RHCGQ9UBD6 479 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 EGFL7Q9UHF1 273 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 FBXO9Q9UK97 447 aaPredicted RBP3.83□□□□□ -1.8
SNX1-205ENST00000559339 ADAM21Q9UKJ8 722 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 FBXL3Q9UKT7 428 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 USP22Q9UPT9 525 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 POFUT2Q9Y2G5 429 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 OTOGQ6ZRI0 2925 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 ROS1P08922 2347 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 A0A1W2PRQ8 180 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 A6NIZ1 184 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 NPIPB13A6NJU9 1138 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 EFCAB9A8MZ26 197 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 B2RBV5 119 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 CENPBD1B2RD01 187 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 SHISA9B4DS77 424 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 NPIPB4C9JG80 1138 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 XKRYO14609 159 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 MGRN1O60291 552 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 UBL3O95164 117 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 RAB36O95755 333 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 HPRP00739 348 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 PTHP01270 115 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 IGKV3-15P01624 115 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 F13BP05160 661 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 FABP3P05413 133 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 H1F0P07305 194 aaKnown RBP3.82□□□□□ -1.8
SNX1-205ENST00000559339 ERCC1P07992 297 aaPredicted RBP3.82□□□□□ -1.8
SNX1-205ENST00000559339 OR8G3PP0DMU2 310 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 IFI30P13284 250 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 HSD17B1P14061 328 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 B4GALT1P15291 398 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 CBR1P16152 277 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 NCK1P16333 377 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 NPR2P20594 1047 aa3.82□□□□□ -1.8
SNX1-205ENST00000559339 LOXP28300 417 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms