RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 CARM1Q86X55 608 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 ZNF584Q8IVC4 421 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 DPP10Q8N608 796 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 ANKK1Q8NFD2 765 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 OR6S1Q8NH40 331 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 KCNS3Q9BQ31 491 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 PRSS27Q9BQR3 290 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 TMEM43Q9BTV4 400 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 SPATA5L1Q9BVQ7 753 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 MRPL37Q9BZE1 423 aaKnown RBP11.69□□□□□ -0.54
VPS18-203ENST00000558855 NPHS2Q9NP85 383 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 TAS2R5Q9NYW4 299 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 LEF1Q9UJU2 399 aaPredicted RBP11.69□□□□□ -0.54
VPS18-203ENST00000558855 ANGPT4Q9Y264 503 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 FKBP7Q9Y680 259 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 FXYD1O00168 92 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 KPNA4O00629 521 aaPredicted RBP11.68□□□□□ -0.54
VPS18-203ENST00000558855 LMX1BO60663 402 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 LILRA1O75019 489 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 SASH3O75995 380 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 STAMBPO95630 424 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 CD79AP11912 226 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 ZNF35P13682 527 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 HOXB1P14653 301 aaPredicted RBP11.68□□□□□ -0.54
VPS18-203ENST00000558855 NPR2P20594 1047 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 BIDP55957 195 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 SF3A3Q12874 501 aaKnown RBP eCLIP11.68□□□□□ -0.54
VPS18-203ENST00000558855 MAD2L1BPQ15013 274 aaPredicted RBP11.68□□□□□ -0.54
VPS18-203ENST00000558855 ZNF74Q16587 644 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 CYP51A1Q16850 503 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 PODNL1Q6PEZ8 512 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 ZNF813Q6ZN06 617 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 ZNF627Q7L945 461 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 SCAIQ8N9R8 606 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 OR4F15Q8NGB8 312 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 ZNF317Q96PQ6 595 aaPredicted RBP11.68□□□□□ -0.54
VPS18-203ENST00000558855 ZNF607Q96SK3 696 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 PIMREGQ9BSJ6 248 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 REPIN1Q9BWE0 567 aaKnown RBP11.68□□□□□ -0.54
VPS18-203ENST00000558855 ASPNQ9BXN1 380 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 KAT8Q9H7Z6 458 aaKnown RBP11.68□□□□□ -0.54
VPS18-203ENST00000558855 TMEM27Q9HBJ8 222 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 MEPEQ9NQ76 525 aaPredicted RBP11.68□□□□□ -0.54
VPS18-203ENST00000558855 INTS9Q9NV88 658 aaKnown RBP11.68□□□□□ -0.54
VPS18-203ENST00000558855 TMEM160Q9NX00 188 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 FZR1Q9UM11 496 aa11.68□□□□□ -0.54
VPS18-203ENST00000558855 LOC390937A0A1W2PQ73 354 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 PRORSD1PA6NEY8 169 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 EVPLLA8MZ36 301 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 CHP2O43745 196 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 EDF1O60869 148 aaKnown RBP11.67□□□□□ -0.54
VPS18-203ENST00000558855 SHOX2O60902 331 aaPredicted RBP11.67□□□□□ -0.54
VPS18-203ENST00000558855 CH25HO95992 272 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 APEHP13798 732 aaKnown RBP11.67□□□□□ -0.54
VPS18-203ENST00000558855 IFNGR1P15260 489 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 ARR3P36575 388 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 RUNX1T1Q06455 604 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 DAG1Q14118 895 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 GSG1Q2KHT4 349 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 RABL3Q5HYI8 236 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 FAM120AOSQ5T036 256 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 CGB2Q6NT52 195 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 RANBP3LQ86VV4 465 aaPredicted RBP11.67□□□□□ -0.54
VPS18-203ENST00000558855 SKA3Q8IX90 412 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 PAQR4Q8N4S7 273 aaPredicted RBP11.67□□□□□ -0.54
VPS18-203ENST00000558855 C10orf53Q8N6V4 93 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 C11orf65Q8NCR3 313 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 OR5J2Q8NH18 312 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 OR10A6Q8NH74 314 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 ADAMTS16Q8TE57 1224 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 DYDC1Q8WWB3 177 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 TMEM54Q969K7 222 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 LRR1Q96L50 414 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 FOXB1Q99853 325 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 SYT3Q9BQG1 590 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 ZNF426Q9BUY5 554 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 ULBP2Q9BZM5 246 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 GMPR2Q9P2T1 348 aaKnown RBP11.67□□□□□ -0.54
VPS18-203ENST00000558855 CDC42EP3Q9UKI2 254 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 SLC7A7Q9UM01 511 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 CORINQ9Y5Q5 1042 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 NOX1Q9Y5S8 564 aa11.67□□□□□ -0.54
VPS18-203ENST00000558855 LOC100289279A0A1B0GTE1 492 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 NDUFS8O00217 210 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 FMO6PO60774 539 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 ADRA2AP08913 450 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 ADORA3P0DMS8 318 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 BMP4P12644 408 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 DAOP14920 347 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 ZNF23P17027 643 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 NR4A1P22736 598 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 AHCYP23526 432 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 GIFP27352 417 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 PCGF2P35227 344 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 GIPRP48546 466 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 PTDSS1P48651 473 aaKnown RBP11.66□□□□□ -0.54
VPS18-203ENST00000558855 SEC24CP53992 1094 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 UGT2B15P54855 530 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 NFYCQ13952 458 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 RAB39AQ14964 217 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms