RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 TGM3Q08188 693 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 GPNMBQ14956 572 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 IL17AQ16552 155 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 LRRC10Q5BKY1 277 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 C9orf135Q5VTT2 229 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 SLC8B1Q6J4K2 584 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 ZNF544Q6NX49 715 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 CERS6Q6ZMG9 384 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 GTPBP8Q8N3Z3 284 aaPredicted RBP3.1□□□□□ -1.91
CASC4-206ENST00000558847 LIX1Q8N485 282 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 RNF175Q8N4F7 328 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 OR6X1Q8NH79 312 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 CXorf40AQ8TE69 158 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 ARPC1AQ92747 370 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 CCDC126Q96EE4 140 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 RASL11BQ9BPW5 248 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 DEFB127Q9H1M4 99 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 NCOR1P1Q9H4R4 102 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 ZNF160Q9HCG1 818 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 IL17CQ9P0M4 197 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 XCL2Q9UBD3 114 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 THSD7BQ9C0I4 1608 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 A0A0G2JN53 185 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 GJE1A6NN92 205 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 H3BNH8 94 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 CDC7O00311 574 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 AIM2O14862 343 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 CASQ2O14958 399 aaPredicted RBP3.09□□□□□ -1.91
CASC4-206ENST00000558847 CLOCKO15516 846 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 EIF3GO75821 320 aaKnown RBP eCLIP3.09□□□□□ -1.91
CASC4-206ENST00000558847 CHTF8P0CG12 524 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 FUT3P21217 361 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 HNRNPH3P31942 346 aaKnown RBP3.09□□□□□ -1.91
CASC4-206ENST00000558847 NAA10P41227 235 aaPredicted RBP3.09□□□□□ -1.91
CASC4-206ENST00000558847 CSNK1DP48730 415 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 CAV2P51636 162 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 CCNHP51946 323 aaPredicted RBP3.09□□□□□ -1.91
CASC4-206ENST00000558847 YWHAGP61981 247 aaKnown RBP eCLIP3.09□□□□□ -1.91
CASC4-206ENST00000558847 ACVR1Q04771 509 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 IL18Q14116 193 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 KIAA0087Q14695 138 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 RNF212Q495C1 297 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 SSX9Q7RTT3 188 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 LHFPL3Q86UP9 236 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 PDIK1LQ8N165 341 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 EID2Q8N6I1 236 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 CCDC54Q8NEL0 328 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 OR2G3Q8NGZ4 309 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 MCOLN3Q8TDD5 553 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 PLEKHF1Q96S99 279 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 C20orf24Q9BUV8 137 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 TMEM185BQ9H7F4 350 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 PDFQ9HBH1 243 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 MMP26Q9NRE1 261 aa3.09□□□□□ -1.91
CASC4-206ENST00000558847 SAMSN1Q9NSI8 373 aaKnown RBP3.09□□□□□ -1.91
CASC4-206ENST00000558847 PACSIN2Q9UNF0 486 aaPredicted RBP3.09□□□□□ -1.91
CASC4-206ENST00000558847 ZNF256Q9Y2P7 627 aaPredicted RBP3.09□□□□□ -1.91
CASC4-206ENST00000558847 NINLQ9Y2I6 1382 aa3.09□□□□□ -1.92
CASC4-206ENST00000558847 USP27XA6NNY8 438 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 LRRIQ3A6PVS8 624 aaPredicted RBP3.08□□□□□ -1.92
CASC4-206ENST00000558847 WRBO00258 174 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 XKRYO14609 159 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 LSM1O15116 133 aaKnown RBP3.08□□□□□ -1.92
CASC4-206ENST00000558847 EEDO75530 441 aaKnown RBP3.08□□□□□ -1.92
CASC4-206ENST00000558847 H6PDO95479 791 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 ALDOBP05062 364 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 GIPP09681 153 aaPredicted RBP3.08□□□□□ -1.92
CASC4-206ENST00000558847 GKN3PP0CG01 181 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 PNMA6AP0CW24 399 aaPredicted RBP3.08□□□□□ -1.92
CASC4-206ENST00000558847 TDGF1P13385 188 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 CRISP2P16562 243 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 TDGF1P3P51864 188 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 GPX6P59796 221 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 RPS15P62841 145 aaKnown RBP3.08□□□□□ -1.92
CASC4-206ENST00000558847 ADARB1P78563 741 aaKnown RBP3.08□□□□□ -1.92
CASC4-206ENST00000558847 MERTKQ12866 999 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 PDIA2Q13087 525 aaKnown RBP3.08□□□□□ -1.92
CASC4-206ENST00000558847 HERPUD1Q15011 391 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 PAGE3Q5JUK9 113 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 CAMK2N1Q7Z7J9 78 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 LUZP2Q86TE4 346 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 BIVMQ86UB2 503 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 DCAF4L2Q8NA75 395 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 C20orf203Q8NBC4 194 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 BBOF1Q8ND07 529 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 SLC22A8Q8TCC7 542 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 NDRG1Q92597 394 aaKnown RBP3.08□□□□□ -1.92
CASC4-206ENST00000558847 ELSPBP1Q96BH3 223 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 NRTNQ99748 197 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 OSBPL10Q9BXB5 764 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 RACGAP1Q9H0H5 632 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 INPP5EQ9NRR6 644 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 CLCF1Q9UBD9 225 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 UXTQ9UBK9 157 aaPredicted RBP3.08□□□□□ -1.92
CASC4-206ENST00000558847 PITPNC1Q9UKF7 332 aa3.08□□□□□ -1.92
CASC4-206ENST00000558847 ATRXP46100 2492 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 IGLV3-22A0A075B6J6 115 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 A8MU10 97 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms