RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 GPR50Q13585 617 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 ACKR1Q16570 336 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 C22orf42Q6IC83 251 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 TMEM91Q6ZNR0 172 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 JAZF1Q86VZ6 243 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 SLC35F2Q8IXU6 374 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 OR6V1Q8N148 313 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 CLEC1AQ8NC01 280 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 OR2T27Q8NH04 317 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 MFSD8Q8NHS3 518 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 THAP4Q8WY91 577 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 BORCS5Q969J3 196 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 RNF166Q96A37 237 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-207ENST00000558763 C4orf36Q96KX1 117 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 FER1L6-AS2Q96M78 137 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 ANGPTL4Q9BY76 406 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 SDHAF3Q9NRP4 125 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 INIPQ9NRY2 104 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 GRHPRQ9UBQ7 328 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 RAXQ9Y2V3 346 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 MED13Q9UHV7 2174 aa11.64□□□□□ -0.55
SMAD3-207ENST00000558763 LIPT2A6NK58 231 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 FAM171A2A8MVW0 826 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 CLDN25C9JDP6 229 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 MS4A18H0YCH9 400 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 MAGEB4O15481 346 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-207ENST00000558763 PLGP00747 810 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-207ENST00000558763 GAAP10253 952 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 PSKH1P11801 424 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 HLA-DOBP13765 273 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 TGM4P49221 684 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 ZNF41P51814 821 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-207ENST00000558763 MS4A18Q3C1V0 323 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 CDONQ4KMG0 1287 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 ZNF684Q5T5D7 378 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 EEF1A1P5Q5VTE0 462 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 NHLRC1Q6VVB1 395 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 VASH1Q7L8A9 365 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-207ENST00000558763 TIGD4Q8IY51 512 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 ZNF511Q8NB15 262 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 OR6K6Q8NGW6 343 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 ASB15Q8WXK1 588 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 PSMF1Q92530 271 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 PGLYRP3Q96LB9 341 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 TTTY10Q9BZA0 68 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 SYT4Q9H2B2 425 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 TXNIPQ9H3M7 391 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 SIAEQ9HAT2 523 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 QPCTLQ9NXS2 382 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 MGAQ8IWI9 3026 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 ZZEF1O43149 2961 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 RRP8O43159 456 aaKnown RBP11.63□□□□□ -0.55
SMAD3-207ENST00000558763 RNF13O43567 381 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 MT-ND5P03915 603 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 CLEC2LP0C7M8 214 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 SHC1P29353 583 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 MAP2K6P52564 334 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 RPL27P61353 136 aaKnown RBP11.63□□□□□ -0.55
SMAD3-207ENST00000558763 RUNX1T1Q06455 604 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 ZP4Q12836 540 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 AIMP2Q13155 320 aaKnown RBP11.63□□□□□ -0.55
SMAD3-207ENST00000558763 CRTC2Q53ET0 693 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-207ENST00000558763 B3GNTL1Q67FW5 361 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-207ENST00000558763 RPTNQ6XPR3 784 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 MDGA2Q7Z553 956 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 ZNF227Q86WZ6 799 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 GPALPP1Q8IXQ4 340 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 SCAIQ8N9R8 606 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 PELI1Q96FA3 418 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 SNX18Q96RF0 628 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 UBL7Q96S82 380 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-207ENST00000558763 TMED9Q9BVK6 235 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 POTEKPQ9BYX7 375 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 FANCFQ9NPI8 374 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 TRIM36Q9NQ86 728 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 ST6GALNAC2Q9UJ37 374 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 POLHQ9Y253 713 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 KLHDC2Q9Y2U9 406 aa11.63□□□□□ -0.55
SMAD3-207ENST00000558763 A6NL46 340 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 H3BML4 177 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 GABRPO00591 440 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 SNPHO15079 494 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 PLPP2O43688 288 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 IL1AP01583 271 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 P2RY4P51582 365 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 OR7A5Q15622 319 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 DEFB109BQ30KR1 87 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 GLYR1Q49A26 553 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-207ENST00000558763 TP53I3Q53FA7 332 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 DMKNQ6E0U4 476 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-207ENST00000558763 UNQ6494/PRO21346Q6UXR6 183 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 PLCZ1Q86YW0 608 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 PM20D2Q8IYS1 436 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 DND1Q8IYX4 353 aaKnown RBP11.62□□□□□ -0.55
SMAD3-207ENST00000558763 SYS1Q8N2H4 156 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 OR5M1Q8NGP8 315 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 RPS4Y2Q8TD47 263 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 SLC25A46Q96AG3 418 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 NDEL1Q9GZM8 345 aa11.62□□□□□ -0.55
SMAD3-207ENST00000558763 RERGLQ9H628 205 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms