RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 TPST2O60704 377 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 STAMBPO95630 424 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 RAB36O95755 333 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 TCN1P20061 433 aaPredicted RBP13.44□□□□□ -0.26
TPM1-211ENST00000558314 HNF1AP20823 631 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 CSNK1A1P48729 337 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 MRPL19P49406 292 aaKnown RBP13.44□□□□□ -0.26
TPM1-211ENST00000558314 BIDP55957 195 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 SELPLGQ14242 412 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 RUNDC3AQ59EK9 446 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 TTMPQ5BVD1 217 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 FAM120AOSQ5T036 256 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 WDFY1Q8IWB7 410 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 C11orf65Q8NCR3 313 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 ZNF540Q8NDQ6 660 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 ADPRHL1Q8NDY3 354 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 ANKK1Q8NFD2 765 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 BHLHE22Q8NFJ8 381 aaPredicted RBP13.44□□□□□ -0.26
TPM1-211ENST00000558314 SLC26A7Q8TE54 656 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 SNX18Q96RF0 628 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 SYT3Q9BQG1 590 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 ZNF442Q9H7R0 627 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 SLC52A3Q9NQ40 469 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 INTS9Q9NV88 658 aaKnown RBP13.44□□□□□ -0.26
TPM1-211ENST00000558314 NDUFAF1Q9Y375 327 aa13.44□□□□□ -0.26
TPM1-211ENST00000558314 TRBV5-3A0A0A0MS03 114 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 M0QX08 132 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 PLPP3O14495 311 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 MFN2O95140 757 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 CH25HO95992 272 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 PATE4P0C8F1 98 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 UMPSP11172 480 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 IFNGR1P15260 489 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 ZNF23P17027 643 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 GPX2P18283 190 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 APEX1P27695 318 aaKnown RBP13.43□□□□□ -0.26
TPM1-211ENST00000558314 GIPRP48546 466 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 ATP4BP51164 291 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 GALK2Q01415 458 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 NFYCQ13952 458 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 MELKQ14680 651 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 TRMT5Q32P41 509 aaKnown RBP13.43□□□□□ -0.26
TPM1-211ENST00000558314 DLEU7Q6UYE1 221 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 RBM45Q8IUH3 476 aaKnown RBP13.43□□□□□ -0.26
TPM1-211ENST00000558314 CCDC36Q8IYA8 594 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 FAM169BQ8N8A8 192 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 SCAIQ8N9R8 606 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 NEU4Q8WWR8 484 aaPredicted RBP13.43□□□□□ -0.26
TPM1-211ENST00000558314 DOK1Q99704 481 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 FOXB1Q99853 325 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 RABEP2Q9H5N1 569 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 TMEM160Q9NX00 188 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 SPEF1Q9Y4P9 236 aa13.43□□□□□ -0.26
TPM1-211ENST00000558314 RNF13O43567 381 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 RAB1AP62820 205 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 CCNIQ14094 377 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 RAB39AQ14964 217 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 DUSP7Q16829 419 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 ENTPD8Q5MY95 495 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 TTC33Q6PID6 262 aaPredicted RBP13.42□□□□□ -0.26
TPM1-211ENST00000558314 SLC35D2Q76EJ3 337 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 SNX32Q86XE0 403 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 PTOV1Q86YD1 416 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 IL17RDQ8NFM7 739 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 OR6T1Q8NGN1 323 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 OR5J2Q8NH18 312 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 OR6S1Q8NH40 331 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 UBASH3BQ8TF42 649 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 SLC41A3Q96GZ6 507 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 CGREF1Q99674 301 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 SOX7Q9BT81 388 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 MRPL37Q9BZE1 423 aaKnown RBP13.42□□□□□ -0.26
TPM1-211ENST00000558314 OR51B6Q9H340 312 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 NARFLQ9H6Q4 476 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 NPHS2Q9NP85 383 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 MRPL39Q9NYK5 338 aaKnown RBP13.42□□□□□ -0.26
TPM1-211ENST00000558314 SLC7A7Q9UM01 511 aa13.42□□□□□ -0.26
TPM1-211ENST00000558314 YLPM1P49750 1951 aaKnown RBP13.41□□□□□ -0.26
TPM1-211ENST00000558314 STAB1Q9NY15 2570 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 MALRD1Q5VYJ5 2156 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 LOC102725191A0A1B0GVB3 256 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 TMEM129A0AVI4 362 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 HIST1H2ABP04908 130 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 NR4A1P22736 598 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 IL2RGP31785 369 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 LSP1P33241 339 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 ALDH3B1P43353 468 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 CHN2P52757 468 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 SF3A3Q12874 501 aaKnown RBP eCLIP13.41□□□□□ -0.26
TPM1-211ENST00000558314 MAD2L1BPQ15013 274 aaPredicted RBP13.41□□□□□ -0.26
TPM1-211ENST00000558314 TRIP10Q15642 601 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 NPTX1Q15818 432 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 CR1LQ2VPA4 569 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 ALKBH6Q3KRA9 238 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 ZNF613Q6PF04 617 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 HIST3H2AQ7L7L0 130 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 PXKQ7Z7A4 578 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 RETREG3Q86VR2 466 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 GPR32P1Q8NGA4 272 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 HIST1H2ACQ93077 130 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms