RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 GUCA1AP43080 201 aaPredicted RBP11.06□□□□□ -0.64
TPM1-209ENST00000558072 SLC25A1P53007 311 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.06□□□□□ -0.64
TPM1-209ENST00000558072 C19orf57Q0VDD7 668 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 SLC35D3Q5M8T2 416 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 RBM48Q5RL73 367 aaKnown RBP11.06□□□□□ -0.64
TPM1-209ENST00000558072 THEM4Q5T1C6 240 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 LCN1P1Q5VSP4 162 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 NXNL2Q5VZ03 156 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 TMEM211Q6ICI0 200 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 ACSM5Q6NUN0 579 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 ZNF585AQ6P3V2 769 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 CHERPQ8IWX8 916 aaKnown RBP11.06□□□□□ -0.64
TPM1-209ENST00000558072 TCEANCQ8N8B7 351 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 OR52E2Q8NGJ4 325 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 OR2T4Q8NH00 348 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 OR4Q3Q8NH05 313 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 ZNF566Q969W8 418 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 CNBD2Q96M20 576 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 NR1H4Q96RI1 486 aaPredicted RBP11.06□□□□□ -0.64
TPM1-209ENST00000558072 ASB6Q9NWX5 421 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 B3GAT1Q9P2W7 334 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 IL20RAQ9UHF4 553 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 NOSIPQ9Y314 301 aaKnown RBP11.06□□□□□ -0.64
TPM1-209ENST00000558072 EMC9Q9Y3B6 208 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 RPL36Q9Y3U8 105 aaKnown RBP11.06□□□□□ -0.64
TPM1-209ENST00000558072 MED12Q93074 2177 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 CACNA1BQ00975 2339 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 ATRXP46100 2492 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 ZNF407Q9C0G0 2248 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 TEX13CA0A0J9YWL9 993 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 PRSS37A4D1T9 235 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 SLC22A31A6NKX4 558 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 H0YC42 278 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 PYCARD-AS1I3L0S3 204 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 PRODHO43272 600 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 ARHGEF9O43307 516 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 TRAF3IP2O43734 574 aaPredicted RBP11.05□□□□□ -0.64
TPM1-209ENST00000558072 MRPL33O75394 65 aaKnown RBP11.05□□□□□ -0.64
TPM1-209ENST00000558072 SERPINI2O75830 405 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 IL2RAP01589 272 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 CCDC159P0C7I6 412 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 HIST1H1CP16403 213 aaKnown RBP11.05□□□□□ -0.64
TPM1-209ENST00000558072 EPHA2P29317 976 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 TIMP3P35625 211 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 CLRN1P58418 232 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 ISL1P61371 349 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 POU4F2Q12837 409 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 MAD2L1BPQ15013 274 aaPredicted RBP11.05□□□□□ -0.64
TPM1-209ENST00000558072 STK11Q15831 433 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 ACSF3Q4G176 576 aaPredicted RBP11.05□□□□□ -0.64
TPM1-209ENST00000558072 C1orf185Q5T7R7 199 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 TMEM236Q5W0B7 351 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 Q6ZPB1 254 aaPredicted RBP11.05□□□□□ -0.64
TPM1-209ENST00000558072 CXXC5Q7LFL8 322 aaKnown RBP11.05□□□□□ -0.64
TPM1-209ENST00000558072 AAED1Q7RTV5 226 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 FGD2Q7Z6J4 655 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 CCDC103Q8IW40 242 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 IQCF1Q8N6M8 205 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 ZNF519Q8TB69 540 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 FNDC9Q8TBE3 224 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 ASB10Q8WXI3 467 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 ROBO4Q8WZ75 1007 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 HDAC2Q92769 488 aaKnown RBP11.05□□□□□ -0.64
TPM1-209ENST00000558072 ZNF845Q96IR2 970 aaPredicted RBP11.05□□□□□ -0.64
TPM1-209ENST00000558072 Q96M85 177 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 TSPAN32Q96QS1 320 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 TRIB1Q96RU8 372 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 VSX1Q9NZR4 365 aaPredicted RBP11.05□□□□□ -0.64
TPM1-209ENST00000558072 KLHL13Q9P2N7 655 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 CLCF1Q9UBD9 225 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 ZNF835Q9Y2P0 537 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 TPRKBQ9Y3C4 175 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 PCDHGB1Q9Y5G3 927 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 FLVCR1Q9Y5Y0 555 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 FKBP7Q9Y680 259 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 KMT2BQ9UMN6 2715 aaPredicted RBP11.05□□□□□ -0.64
TPM1-209ENST00000558072 PIEZO2Q9H5I5 2752 aa11.05□□□□□ -0.64
TPM1-209ENST00000558072 MBD3L4A6NDZ8 208 aaPredicted RBP11.04□□□□□ -0.64
TPM1-209ENST00000558072 MBD3L3A6NE82 208 aaPredicted RBP11.04□□□□□ -0.64
TPM1-209ENST00000558072 MBD3L5A6NJ08 208 aaPredicted RBP11.04□□□□□ -0.64
TPM1-209ENST00000558072 ZNF716A6NP11 495 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 KDM4EB2RXH2 506 aaPredicted RBP11.04□□□□□ -0.64
TPM1-209ENST00000558072 SLC19A2O60779 497 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 CNOT4O95628 575 aaKnown RBP11.04□□□□□ -0.64
TPM1-209ENST00000558072 IGFBP1P08833 259 aaPredicted RBP11.04□□□□□ -0.64
TPM1-209ENST00000558072 BIDP55957 195 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 PER3P56645 1201 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 CLDN17P56750 224 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 EFNB1P98172 346 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 CDK5R2Q13319 367 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 KLHL22Q53GT1 634 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 SOWAHCQ53LP3 525 aaPredicted RBP11.04□□□□□ -0.64
TPM1-209ENST00000558072 SLC35F1Q5T1Q4 408 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 RIPPLY2Q5TAB7 128 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 LEG1Q6P5S2 330 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 B3GNT6Q6ZMB0 384 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 CD163Q86VB7 1156 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 IGFN1Q86VF2 1251 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 ENTHD1Q8IYW4 607 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms