RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 MT-ATP6P00846 226 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 HLA-HP01893 362 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 B4GALT1P15291 398 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 PCBP3P57721 371 aaKnown RBP12.67□□□□□ -0.38
SHMT2-235ENST00000557740 MTPNP58546 118 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 CAMK2DQ13557 499 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 NFYCQ13952 458 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 PHYHD1Q5SRE7 291 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 KRT80Q6KB66 452 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 ZNF613Q6PF04 617 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 PTOV1Q86YD1 416 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 SLC30A8Q8IWU4 369 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 OR5J2Q8NH18 312 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 CKAP2Q8WWK9 683 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 STON2Q8WXE9 905 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 ARHGDIGQ99819 225 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 WFDC6Q9BQY6 131 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 BPESC1Q9GZL8 116 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 CHODLQ9H9P2 273 aa12.67□□□□□ -0.38
SHMT2-235ENST00000557740 IGHV4-61A0A0C4DH41 118 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 CPSF4LA6NMK7 179 aaKnown RBP12.66□□□□□ -0.38
SHMT2-235ENST00000557740 HMGB1P1B2RPK0 211 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-235ENST00000557740 LRRN3E7EW58 273 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 C11orf98E9PRG8 122 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 CHP2O43745 196 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 OR6A2O95222 327 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 RAB36O95755 333 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 C8BP07358 591 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 VIMP08670 466 aaKnown RBP12.66□□□□□ -0.38
SHMT2-235ENST00000557740 ADORA3P0DMS8 318 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 DAOP14920 347 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 HNF1AP20823 631 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 IGFBP5P24593 272 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 CSNK1A1P48729 337 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 PXKQ7Z7A4 578 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 PATL1Q86TB9 770 aaKnown RBP12.66□□□□□ -0.38
SHMT2-235ENST00000557740 DPP10Q8N608 796 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 SLC26A7Q8TE54 656 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 NEU4Q8WWR8 484 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-235ENST00000557740 TXNDC15Q96J42 360 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 FOXB1Q99853 325 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 B3GNT2Q9NY97 397 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 CMAHPQ9Y471 501 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 SPEF1Q9Y4P9 236 aa12.66□□□□□ -0.38
SHMT2-235ENST00000557740 SH3PXD2BA1X283 911 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 M0QX08 132 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 PHF1O43189 567 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-235ENST00000557740 ZNF23P17027 643 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 SRD5A1P18405 259 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 NR4A1P22736 598 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 LSP1P33241 339 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 PCGF2P35227 344 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 PTDSS1P48651 473 aaKnown RBP12.65□□□□□ -0.38
SHMT2-235ENST00000557740 BIDP55957 195 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 SELPLGQ14242 412 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 DUSP7Q16829 419 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 TRMT5Q32P41 509 aaKnown RBP12.65□□□□□ -0.38
SHMT2-235ENST00000557740 ENTPD8Q5MY95 495 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 INTS11Q5TA45 600 aaKnown RBP12.65□□□□□ -0.38
SHMT2-235ENST00000557740 ZNF627Q7L945 461 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 PHC2Q8IXK0 858 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 CDK20Q8IZL9 346 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 ARIH2OSQ8N7S6 290 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 GPR32P1Q8NGA4 272 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 OR6T1Q8NGN1 323 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 VANGL1Q8TAA9 524 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-235ENST00000557740 MSI2Q96DH6 328 aaKnown RBP12.65□□□□□ -0.38
SHMT2-235ENST00000557740 MS4A3Q96HJ5 214 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 MAGEB18Q96M61 343 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 DOK1Q99704 481 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 DENND2DQ9H6A0 471 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-235ENST00000557740 NPHS2Q9NP85 383 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 FBXL3Q9UKT7 428 aa12.65□□□□□ -0.38
SHMT2-235ENST00000557740 ANK3Q12955 4377 aaKnown RBP12.64□□□□□ -0.39
SHMT2-235ENST00000557740 TRAPPC13A5PLN9 417 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 KPNA4O00629 521 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-235ENST00000557740 ENTPD5O75356 428 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 UBL3O95164 117 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 STAMBPO95630 424 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 CH25HO95992 272 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 ADRA2AP08913 450 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 IFNGR1P15260 489 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 CD247P20963 164 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 GIPRP48546 466 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 RPS23P62266 143 aaKnown RBP12.64□□□□□ -0.39
SHMT2-235ENST00000557740 GALK2Q01415 458 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 PIGFQ07326 219 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 NPTX1Q15818 432 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 ZNF74Q16587 644 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 GKAP1Q5VSY0 366 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-235ENST00000557740 TTC33Q6PID6 262 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-235ENST00000557740 SLC35D2Q76EJ3 337 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 RETREG3Q86VR2 466 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 WDFY1Q8IWB7 410 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 ADAMTS16Q8TE57 1224 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 TSPEARQ8WU66 669 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 SIKE1Q9BRV8 207 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 ZNF385DQ9H6B1 395 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 KAT8Q9H7Z6 458 aaKnown RBP12.64□□□□□ -0.39
SHMT2-235ENST00000557740 NANSQ9NR45 359 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms