RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 SLC26A1Q9H2B4 701 aa2.57□□□□□ -2
VRK1-207ENST00000557352 MFSD1Q9H3U5 465 aa2.57□□□□□ -2
VRK1-207ENST00000557352 RHOJQ9H4E5 214 aa2.57□□□□□ -2
VRK1-207ENST00000557352 VPS37BQ9H9H4 285 aa2.57□□□□□ -2
VRK1-207ENST00000557352 POPDC3Q9HBV1 291 aa2.57□□□□□ -2
VRK1-207ENST00000557352 SLC25A19Q9HC21 320 aa2.57□□□□□ -2
VRK1-207ENST00000557352 MID1IP1Q9NPA3 183 aa2.57□□□□□ -2
VRK1-207ENST00000557352 NT5MQ9NPB1 228 aa2.57□□□□□ -2
VRK1-207ENST00000557352 TRPV5Q9NQA5 729 aa2.57□□□□□ -2
VRK1-207ENST00000557352 PNPLA3Q9NST1 481 aa2.57□□□□□ -2
VRK1-207ENST00000557352 ACOXLQ9NUZ1 547 aa2.57□□□□□ -2
VRK1-207ENST00000557352 TECRQ9NZ01 308 aaKnown RBP2.57□□□□□ -2
VRK1-207ENST00000557352 EPS15L1Q9UBC2 864 aa2.57□□□□□ -2
VRK1-207ENST00000557352 CHMP2BQ9UQN3 213 aa2.57□□□□□ -2
VRK1-207ENST00000557352 IKBKGQ9Y6K9 419 aa2.57□□□□□ -2
VRK1-207ENST00000557352 ASCC3Q8N3C0 2202 aaKnown RBP2.57□□□□□ -2
VRK1-207ENST00000557352 EYSQ5T1H1 3165 aa2.56□□□□□ -2
VRK1-207ENST00000557352 ZDBF2Q9HCK1 2354 aa2.56□□□□□ -2
VRK1-207ENST00000557352 A0A0J9YYE9 177 aa2.56□□□□□ -2
VRK1-207ENST00000557352 GOLGA6L7A0A1B0GV03 622 aa2.56□□□□□ -2
VRK1-207ENST00000557352 TMEM120BA0PK00 339 aa2.56□□□□□ -2
VRK1-207ENST00000557352 MEI4A8MW99 385 aa2.56□□□□□ -2
VRK1-207ENST00000557352 GOLGA8MH3BSY2 632 aa2.56□□□□□ -2
VRK1-207ENST00000557352 PSMD11O00231 422 aa2.56□□□□□ -2
VRK1-207ENST00000557352 PFDN6O15212 129 aa2.56□□□□□ -2
VRK1-207ENST00000557352 BIRC5O15392 142 aa2.56□□□□□ -2
VRK1-207ENST00000557352 EMC8O43402 210 aa2.56□□□□□ -2
VRK1-207ENST00000557352 WISP3O95389 354 aaPredicted RBP2.56□□□□□ -2
VRK1-207ENST00000557352 IGSF6O95976 241 aa2.56□□□□□ -2
VRK1-207ENST00000557352 FAM107AO95990 144 aa2.56□□□□□ -2
VRK1-207ENST00000557352 TRBC1P01850 177 aa2.56□□□□□ -2
VRK1-207ENST00000557352 CISD3P0C7P0 127 aa2.56□□□□□ -2
VRK1-207ENST00000557352 B4GALT1P15291 398 aa2.56□□□□□ -2
VRK1-207ENST00000557352 ZNF30P17039 623 aa2.56□□□□□ -2
VRK1-207ENST00000557352 RPS3P23396 243 aaKnown RBP eCLIP2.56□□□□□ -26e-15■□□□□ 10.6
VRK1-207ENST00000557352 CRABP2P29373 138 aa2.56□□□□□ -2
VRK1-207ENST00000557352 SERPINB5P36952 375 aa2.56□□□□□ -2
VRK1-207ENST00000557352 CSKP41240 450 aa2.56□□□□□ -2
VRK1-207ENST00000557352 CD86P42081 329 aa2.56□□□□□ -2
VRK1-207ENST00000557352 GRIA1P42261 906 aa2.56□□□□□ -2
VRK1-207ENST00000557352 SERPINB8P50452 374 aa2.56□□□□□ -2
VRK1-207ENST00000557352 KPNA2P52292 529 aaKnown RBP2.56□□□□□ -2
VRK1-207ENST00000557352 SLC7A2P52569 658 aa2.56□□□□□ -2
VRK1-207ENST00000557352 ZNF140P52738 457 aaPredicted RBP2.56□□□□□ -2
VRK1-207ENST00000557352 STC1P52823 247 aa2.56□□□□□ -2
VRK1-207ENST00000557352 UCP2P55851 309 aa2.56□□□□□ -2
VRK1-207ENST00000557352 RHOAP61586 193 aa2.56□□□□□ -2
VRK1-207ENST00000557352 IL9RQ01113 521 aa2.56□□□□□ -2
VRK1-207ENST00000557352 GALK2Q01415 458 aa2.56□□□□□ -2
VRK1-207ENST00000557352 RAD51Q06609 339 aa2.56□□□□□ -2
VRK1-207ENST00000557352 TSTA3Q13630 321 aaPredicted RBP2.56□□□□□ -2
VRK1-207ENST00000557352 PDE7AQ13946 482 aa2.56□□□□□ -2
VRK1-207ENST00000557352 SERTAD2Q14140 314 aa2.56□□□□□ -2
VRK1-207ENST00000557352 IHHQ14623 411 aa2.56□□□□□ -2
VRK1-207ENST00000557352 CYTH1Q15438 398 aa2.56□□□□□ -2
VRK1-207ENST00000557352 ZKSCAN8Q15776 578 aaPredicted RBP2.56□□□□□ -2
VRK1-207ENST00000557352 PDK4Q16654 411 aa2.56□□□□□ -2
VRK1-207ENST00000557352 CCDC153Q494R4 210 aa2.56□□□□□ -2
VRK1-207ENST00000557352 ARMC12Q5T9G4 340 aa2.56□□□□□ -2
VRK1-207ENST00000557352 C22orf39Q6P5X5 142 aa2.56□□□□□ -2
VRK1-207ENST00000557352 AFTPHQ6ULP2 937 aa2.56□□□□□ -2
VRK1-207ENST00000557352 CERS6Q6ZMG9 384 aa2.56□□□□□ -2
VRK1-207ENST00000557352 TMEM25Q86YD3 366 aa2.56□□□□□ -2
VRK1-207ENST00000557352 STHQ8IWL8 128 aa2.56□□□□□ -2
VRK1-207ENST00000557352 STK40Q8N2I9 435 aa2.56□□□□□ -2
VRK1-207ENST00000557352 DNAAF3Q8N9W5 541 aa2.56□□□□□ -2
VRK1-207ENST00000557352 IPMKQ8NFU5 416 aa2.56□□□□□ -2
VRK1-207ENST00000557352 OR4L1Q8NH43 312 aa2.56□□□□□ -2
VRK1-207ENST00000557352 RDH11Q8TC12 318 aa2.56□□□□□ -2
VRK1-207ENST00000557352 WFDC5Q8TCV5 224 aa2.56□□□□□ -2
VRK1-207ENST00000557352 DDI1Q8WTU0 396 aa2.56□□□□□ -2
VRK1-207ENST00000557352 PIH1D2Q8WWB5 315 aa2.56□□□□□ -2
VRK1-207ENST00000557352 FGF13Q92913 245 aa2.56□□□□□ -2
VRK1-207ENST00000557352 GLYATL1Q969I3 302 aa2.56□□□□□ -2
VRK1-207ENST00000557352 FAM131CQ96AQ9 280 aa2.56□□□□□ -2
VRK1-207ENST00000557352 BIRC7Q96CA5 298 aa2.56□□□□□ -2
VRK1-207ENST00000557352 VPS39Q96JC1 886 aa2.56□□□□□ -2
VRK1-207ENST00000557352 CXorf58Q96LI9 332 aa2.56□□□□□ -2
VRK1-207ENST00000557352 ZNF317Q96PQ6 595 aaPredicted RBP2.56□□□□□ -2
VRK1-207ENST00000557352 SIKE1Q9BRV8 207 aa2.56□□□□□ -2
VRK1-207ENST00000557352 FICDQ9BVA6 458 aa2.56□□□□□ -2
VRK1-207ENST00000557352 FUNDC2Q9BWH2 189 aa2.56□□□□□ -2
VRK1-207ENST00000557352 BBS2Q9BXC9 721 aa2.56□□□□□ -2
VRK1-207ENST00000557352 CAPS2Q9BXY5 557 aa2.56□□□□□ -2
VRK1-207ENST00000557352 ABCG4Q9H172 646 aa2.56□□□□□ -2
VRK1-207ENST00000557352 TMEM245Q9H330 911 aa2.56□□□□□ -2
VRK1-207ENST00000557352 DCLRE1BQ9H816 532 aa2.56□□□□□ -2
VRK1-207ENST00000557352 ZFP14Q9HCL3 533 aa2.56□□□□□ -2
VRK1-207ENST00000557352 MIEF1Q9NQG6 463 aa2.56□□□□□ -2
VRK1-207ENST00000557352 DDX28Q9NUL7 540 aaKnown RBP2.56□□□□□ -2
VRK1-207ENST00000557352 DNAJC11Q9NVH1 559 aa2.56□□□□□ -2
VRK1-207ENST00000557352 NLE1Q9NVX2 485 aaPredicted RBP2.56□□□□□ -2
VRK1-207ENST00000557352 SMOXQ9NWM0 555 aa2.56□□□□□ -2
VRK1-207ENST00000557352 DUS2Q9NX74 493 aaKnown RBP2.56□□□□□ -2
VRK1-207ENST00000557352 NKIRAS1Q9NYS0 192 aa2.56□□□□□ -2
VRK1-207ENST00000557352 AKAP7Q9P0M2 348 aaPredicted RBP2.56□□□□□ -2
VRK1-207ENST00000557352 ERVK-18Q9QC07 812 aa2.56□□□□□ -2
VRK1-207ENST00000557352 DCDC2Q9UHG0 476 aa2.56□□□□□ -2
VRK1-207ENST00000557352 KLK12Q9UKR0 248 aa2.56□□□□□ -2
VRK1-207ENST00000557352 CCL26Q9Y258 94 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms