RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 A0A1B0GX12 115 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 CHP2O43745 196 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 KRT34O76011 436 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 CBLP22681 906 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 HTR2AP28223 471 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 CAPZA2P47755 286 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 P2RY4P51582 365 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 NUDT6P53370 316 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 FOXG1P55316 489 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-222ENST00000556768 ROR2Q01974 943 aaKnown RBP6.41□□□□□ -1.38
SCFD1-222ENST00000556768 DMTNQ08495 405 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 PUDPQ08623 228 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 VMACQ2NL98 169 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 TBRG1Q3YBR2 411 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 GLIPR1L2Q4G1C9 344 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 TMEM177Q53S58 311 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 NANOGP8Q6NSW7 305 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 ERICH5Q6P6B1 374 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 CLEC2AQ6UVW9 174 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 DTX2Q86UW9 622 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 EPHX4Q8IUS5 362 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 C10orf111Q8N326 155 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 WDR31Q8NA23 367 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 ADPRHL1Q8NDY3 354 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 IL17RDQ8NFM7 739 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 OR8J3Q8NGG0 315 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 OR1K1Q8NGR3 316 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 MAGEE2Q8TD90 523 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-222ENST00000556768 ADAMTS16Q8TE57 1224 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 IGFBPL1Q8WX77 278 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 LRRC58Q96CX6 371 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 BOD1Q96IK1 185 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 MPP4Q96JB8 637 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 TMEM43Q9BTV4 400 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 TRAF4Q9BUZ4 470 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-222ENST00000556768 PTDSS2Q9BVG9 487 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 NANOGQ9H9S0 305 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 MED4Q9NPJ6 270 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 NANSQ9NR45 359 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 FGFR1OP2Q9NVK5 253 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 MRPL39Q9NYK5 338 aaKnown RBP6.41□□□□□ -1.38
SCFD1-222ENST00000556768 AP3M1Q9Y2T2 418 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 HIVEP2P31629 2446 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 TRAPPC13A5PLN9 417 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 CPSF4LA6NMK7 179 aaKnown RBP6.4□□□□□ -1.38
SCFD1-222ENST00000556768 E7EQL1 145 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 RPL36A-HNRNPH2H7BZ11 118 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 SSX4O60224 188 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 UPK3AO75631 287 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 LY6G6DO95868 133 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 ERCC1P07992 297 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-222ENST00000556768 ADORA3P0DMS8 318 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 UMPSP11172 480 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 PCGF2P35227 344 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 ARR3P36575 388 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 PCBP3P57721 371 aaKnown RBP6.4□□□□□ -1.38
SCFD1-222ENST00000556768 POU3F1Q03052 451 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-222ENST00000556768 TNK1Q13470 666 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 ODF1Q14990 250 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 KRTAP21-3Q3LHN1 58 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 ENTPD8Q5MY95 495 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 SEZ6L2Q6UXD5 910 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 PXKQ7Z7A4 578 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 PTOV1Q86YD1 416 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 CIARTQ8N365 385 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-222ENST00000556768 OR6N1Q8NGY5 312 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 VANGL1Q8TAA9 524 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-222ENST00000556768 LZICQ8WZA0 190 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 LRR1Q96L50 414 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 SLC38A2Q96QD8 506 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 KATNB1Q9BVA0 655 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 CACNG6Q9BXT2 260 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 REG4Q9BYZ8 158 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 SLC19A3Q9BZV2 496 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 ZNF385DQ9H6B1 395 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 KLHL14Q9P2G3 628 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 TMEFF2Q9UIK5 374 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-222ENST00000556768 MOKQ9UQ07 419 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 POFUT2Q9Y2G5 429 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 SH3GLB1Q9Y371 365 aa6.4□□□□□ -1.38
SCFD1-222ENST00000556768 ABCA2Q9BZC7 2435 aa6.4□□□□□ -1.39
SCFD1-222ENST00000556768 USF3Q68DE3 2245 aa6.4□□□□□ -1.39
SCFD1-222ENST00000556768 ZNF99A8MXY4 864 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-222ENST00000556768 M0R3G1 203 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 M0R3H8 397 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 MRASO14807 208 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 SLC22A2O15244 555 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 RNF13O43567 381 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 CCDC22O60826 627 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 SERPINI2O75830 405 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 ZNF432O94892 652 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 CD8AP01732 235 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 OPN1SWP03999 348 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 ACVR1BP36896 505 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 SERPINF1P36955 418 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 TAS2R41P59536 307 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 SNRPD2P62316 118 aaKnown RBP6.39□□□□□ -1.39
SCFD1-222ENST00000556768 ARF1P84077 181 aaKnown RBP6.39□□□□□ -1.39
SCFD1-222ENST00000556768 KLF10Q13118 480 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 NPTX1Q15818 432 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms