RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 A0A096LPI6 279 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 A8MV72 311 aaPredicted RBP5.84□□□□□ -1.47
PSEN1-216ENST00000556066 NR5A2O00482 541 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 GYG2O15488 501 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 TLX2O43763 284 aaPredicted RBP5.84□□□□□ -1.47
PSEN1-216ENST00000556066 CD5LO43866 347 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 LY6HO94772 140 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 VAMP5O95183 116 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 PNMTP11086 282 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 CBLP22681 906 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 APOBEC3AP31941 199 aaPredicted RBP5.84□□□□□ -1.47
PSEN1-216ENST00000556066 CLDN17P56750 224 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 DSCR9P59020 149 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 TUBA1BP68363 451 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 TUBA4AP68366 448 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 C1DQ13901 141 aaKnown RBP5.84□□□□□ -1.47
PSEN1-216ENST00000556066 CARTPTQ16568 116 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 TBRG1Q3YBR2 411 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 HMBOX1Q6NT76 420 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 VHLLQ6RSH7 139 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 DNM1P46Q6ZS02 220 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 CREB3L2Q70SY1 520 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 TUBA1AQ71U36 451 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 POU5F2Q8N7G0 328 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 NFKBIDQ8NI38 313 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 BBS10Q8TAM1 723 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 FAM168AQ92567 244 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 GTF2H4Q92759 462 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 C3orf49Q96BT1 292 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 KTI12Q96EK9 354 aaPredicted RBP5.84□□□□□ -1.47
PSEN1-216ENST00000556066 FAM46AQ96IP4 442 aaKnown RBP5.84□□□□□ -1.47
PSEN1-216ENST00000556066 SIKE1Q9BRV8 207 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 PAIP1Q9H074 479 aaKnown RBP5.84□□□□□ -1.47
PSEN1-216ENST00000556066 RAD21L1Q9H4I0 556 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 DENND2DQ9H6A0 471 aaPredicted RBP5.84□□□□□ -1.47
PSEN1-216ENST00000556066 A4GALTQ9NPC4 353 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 TCF7L2Q9NQB0 619 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 CCDC167Q9P0B6 97 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 NKX1-2Q9UD57 310 aaPredicted RBP5.84□□□□□ -1.47
PSEN1-216ENST00000556066 SEC14L4Q9UDX3 406 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 RASD1Q9Y272 281 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 HIF3AQ9Y2N7 669 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 PMF1-BGLAPU3KQ54 211 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 MGAM2Q2M2H8 2515 aa5.84□□□□□ -1.47
PSEN1-216ENST00000556066 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.83□□□□□ -1.48
PSEN1-216ENST00000556066 IGHV1-18A0A0C4DH31 117 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 H7C417 338 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 UPK3AO75631 287 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 CRYAAP02489 173 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 ZNF43P17038 809 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 AQP1P29972 269 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 CAPZA2P47755 286 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 P2RY4P51582 365 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 MNAT1P51948 309 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 EFNA4P52798 201 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 SNRPD2P62316 118 aaKnown RBP5.83□□□□□ -1.48
PSEN1-216ENST00000556066 ROR2Q01974 943 aaKnown RBP5.83□□□□□ -1.48
PSEN1-216ENST00000556066 KLF10Q13118 480 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 FADDQ13158 208 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 TMEM249Q2WGJ8 235 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 CHRFAM7AQ494W8 412 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 GCNT6Q5T4J0 391 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 ANKRD16Q6P6B7 361 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 LINGO2Q7L985 606 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 SLC46A3Q7Z3Q1 461 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 KRT73Q86Y46 540 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 HIPK1Q86Z02 1210 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 EPHX4Q8IUS5 362 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 GPR137CQ8N3F9 429 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 RBM15BQ8NDT2 890 aaKnown RBP5.83□□□□□ -1.48
PSEN1-216ENST00000556066 OR10H5Q8NGA6 315 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 OR1K1Q8NGR3 316 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 MFSD8Q8NHS3 518 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 TAAR8Q969N4 342 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 SPDL1Q96EA4 605 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 MEGF10Q96KG7 1140 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 SLC38A2Q96QD8 506 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 TNFRSF13CQ96RJ3 184 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 VRK1Q99986 396 aaPredicted RBP5.83□□□□□ -1.48
PSEN1-216ENST00000556066 SSBP4Q9BWG4 385 aaPredicted RBP5.83□□□□□ -1.48
PSEN1-216ENST00000556066 BCL2L10Q9HD36 194 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 OBP2BQ9NPH6 170 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 SLC25A37Q9NYZ2 338 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 SELENONQ9NZV5 590 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 SLAMF8Q9P0V8 285 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.83□□□□□ -1.48
PSEN1-216ENST00000556066 SLC13A4Q9UKG4 626 aa5.83□□□□□ -1.48
PSEN1-216ENST00000556066 POLR3KQ9Y2Y1 108 aaPredicted RBP5.83□□□□□ -1.48
PSEN1-216ENST00000556066 MEGF8Q7Z7M0 2845 aa5.82□□□□□ -1.48
PSEN1-216ENST00000556066 LOC100653049A0A140TA62 436 aa5.82□□□□□ -1.48
PSEN1-216ENST00000556066 A0A1B0GWA3 101 aa5.82□□□□□ -1.48
PSEN1-216ENST00000556066 OR6C65A6NJZ3 312 aa5.82□□□□□ -1.48
PSEN1-216ENST00000556066 RNF212BA8MTL3 300 aa5.82□□□□□ -1.48
PSEN1-216ENST00000556066 EVPLLA8MZ36 301 aa5.82□□□□□ -1.48
PSEN1-216ENST00000556066 FTCDNL1E5RQL4 147 aa5.82□□□□□ -1.48
PSEN1-216ENST00000556066 AIM2O14862 343 aa5.82□□□□□ -1.48
PSEN1-216ENST00000556066 OR2T1O43869 369 aa5.82□□□□□ -1.48
PSEN1-216ENST00000556066 TPST1O60507 370 aa5.82□□□□□ -1.48
PSEN1-216ENST00000556066 NPIPB7O75200 414 aa5.82□□□□□ -1.48
PSEN1-216ENST00000556066 ENTPD5O75356 428 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms