RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 FBXW9Q5XUX1 488 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 HMBOX1Q6NT76 420 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 FAHD1Q6P587 224 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 VWA1Q6PCB0 445 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 ZNF620Q6ZNG0 422 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 ZBTB49Q6ZSB9 765 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 NUFIP2Q7Z417 695 aaKnown RBP6.77□□□□□ -1.33
TDP1-214ENST00000556063 TMEM179BQ7Z7N9 219 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 KIF18BQ86Y91 864 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 ZIC4Q8N9L1 334 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 ZNF610Q8N9Z0 462 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 OR6N1Q8NGY5 312 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 ZNF566Q969W8 418 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 EME1Q96AY2 570 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 SLC25A44Q96H78 314 aaPredicted RBP6.77□□□□□ -1.33
TDP1-214ENST00000556063 LRR1Q96L50 414 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 ZNF385AQ96PM9 386 aaKnown RBP6.77□□□□□ -1.33
TDP1-214ENST00000556063 GPX7Q96SL4 187 aaPredicted RBP6.77□□□□□ -1.33
TDP1-214ENST00000556063 USB1Q9BQ65 265 aaKnown RBP6.77□□□□□ -1.33
TDP1-214ENST00000556063 KATNB1Q9BVA0 655 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 IFT27Q9BW83 186 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 PRRG3Q9BZD7 231 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 LINC00470Q9BZP3 86 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 GABARAPL1Q9H0R8 117 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 SLCO5A1Q9H2Y9 848 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 OR52D1Q9H346 318 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 MCCC2Q9HCC0 563 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 PAPOLBQ9NRJ5 636 aaKnown RBP6.77□□□□□ -1.33
TDP1-214ENST00000556063 KRT84Q9NSB2 600 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 TBC1D23Q9NUY8 699 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 ASB6Q9NWX5 421 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 MED29Q9NX70 200 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 ELOVL5Q9NYP7 299 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 IL20Q9NYY1 176 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 OAZ3Q9UMX2 235 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 KALRNO60229 2985 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 SLC35F4A4IF30 521 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 WIPF3A6NGB9 483 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 ZNF587BE7ETH6 402 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 AHCYL1O43865 530 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 CGAP01215 116 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 IFNGP01579 166 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 IGHMP01871 453 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 HMGN1P05114 100 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 HLA-DOBP13765 273 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 ACADSP16219 412 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 IGFBP5P24593 272 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 POU1F1P28069 291 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 SDHAP31040 664 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 ACVR1BP36896 505 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 SELENOPP49908 381 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 SH3BGRP55822 239 aaPredicted RBP6.76□□□□□ -1.33
TDP1-214ENST00000556063 CLRN1P58418 232 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 ESRRGP62508 458 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 ERVK-25P63136 954 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 CAMK2DQ13557 499 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 TRIP10Q15642 601 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 FBXL19-AS1Q494R0 122 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 SLC36A3Q495N2 470 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 KLHL17Q6TDP4 642 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 TFAP2EQ6VUC0 442 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 Q6ZT83 130 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 LUZP2Q86TE4 346 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 ADCK1Q86TW2 530 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 IGFN1Q86VF2 1251 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 LIX1LQ8IVB5 337 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 HS3ST5Q8IZT8 346 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 PARP8Q8N3A8 854 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 ARIH2OSQ8N7S6 290 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 LRRC75AQ8NAA5 344 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 RELL2Q8NC24 303 aaPredicted RBP6.76□□□□□ -1.33
TDP1-214ENST00000556063 OR2T33Q8NG76 320 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 ASB10Q8WXI3 467 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 RNASE6Q93091 150 aaKnown RBP6.76□□□□□ -1.33
TDP1-214ENST00000556063 TXNDC15Q96J42 360 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 SAMD8Q96LT4 415 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 ZNF570Q96NI8 536 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 ERMAPQ96PL5 475 aaPredicted RBP6.76□□□□□ -1.33
TDP1-214ENST00000556063 RBP7Q96R05 134 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 OR2M2Q96R28 347 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 GPA33Q99795 319 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 CIB1Q99828 191 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 NIPSNAP1Q9BPW8 284 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 ALG12Q9BV10 488 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 EMC6Q9BV81 110 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 RBM24Q9BX46 236 aaKnown RBP6.76□□□□□ -1.33
TDP1-214ENST00000556063 TSSK6Q9BXA6 273 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 HDHD5Q9BXW7 423 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 ULBP2Q9BZM5 246 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 ENKD1Q9H0I2 346 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 OPN3Q9H1Y3 402 aaPredicted RBP6.76□□□□□ -1.33
TDP1-214ENST00000556063 VCXQ9H320 206 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 NRIP3Q9NQ35 241 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 JKAMPQ9P055 326 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 MALT1Q9UDY8 824 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 ZNF346Q9UL40 294 aaKnown RBP6.76□□□□□ -1.33
TDP1-214ENST00000556063 IER3IP1Q9Y5U9 82 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 KLF2Q9Y5W3 355 aaPredicted RBP6.76□□□□□ -1.33
TDP1-214ENST00000556063 PKDREJQ9NTG1 2253 aa6.76□□□□□ -1.33
TDP1-214ENST00000556063 USP9XQ93008 2570 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms