RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	KRR1	Q13601	381 aa	Known RBP	11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	GINS1	Q14691	196 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	PTGES3	Q15185	160 aa	Known RBP	11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	PGGHG	Q32M88	737 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	ADCK1	Q86TW2	530 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	UBE2J2	Q8N2K1	259 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	GPR137C	Q8N3F9	429 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	LNX2	Q8N448	690 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	MARVELD2	Q8N4S9	558 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	ARIH2OS	Q8N7S6	290 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	LRRC75A	Q8NAA5	344 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	ZNF555	Q8NEP9	628 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	OR8D4	Q8NGM9	314 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	OR6N1	Q8NGY5	312 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	ASB5	Q8WWX0	329 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	ASB10	Q8WXI3	467 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	SLC25A44	Q96H78	314 aa	Predicted RBP	11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	TSPAN32	Q96QS1	320 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	SLC29A1	Q99808	456 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	EMC6	Q9BV81	110 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	PIGM	Q9H3S5	423 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	TOR3A	Q9H497	397 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	B3GAT2	Q9NPZ5	323 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	UPB1	Q9UBR1	384 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904		Q9UFV3	132 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	ING1	Q9UK53	422 aa	Predicted RBP	11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	FREM3	P0C091	2139 aa		11.11	□□□□□ -0.63
ABCD4-223	ENST00000555904	TEX13C	A0A0J9YWL9	993 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	CENPBD1	B2RD01	187 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	EEF1E1-BLOC1S5	C9J1V9	151 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	BHLHE40	O14503	412 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	ARHGEF9	O43307	516 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	EEF1E1	O43324	174 aa	Known RBP	11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	TNFSF13	O75888	250 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	SNAP29	O95721	258 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	IL18BP	O95998	194 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	TP53	P04637	393 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	HMGN1	P05114	100 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	IGFBP1	P08833	259 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	ACADS	P16219	412 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	BMP5	P22003	454 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	PAICS	P22234	425 aa	Known RBP	11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	CHRNB4	P30926	498 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	GRK5	P34947	590 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	VHL	P40337	213 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	GIPR	P48546	466 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	CSNK1A1	P48729	337 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	SELENOP	P49908	381 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	CD47	Q08722	323 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	CAMK2D	Q13557	499 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	GUSBP1	Q15486	140 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	ZIK1	Q3SY52	487 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	CARD17	Q5XLA6	110 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	FAM122B	Q7Z309	247 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	IQCF1	Q8N6M8	205 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	ZIC4	Q8N9L1	334 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	POMGNT2	Q8NAT1	580 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	NAXE	Q8NCW5	288 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	NOXO1	Q8NFA2	376 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	FNDC8	Q8TC99	324 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	NRG4	Q8WWG1	115 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	CCDC120	Q96HB5	630 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	TXNDC15	Q96J42	360 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904		Q96M85	177 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	OR2M2	Q96R28	347 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	ENKD1	Q9H0I2	346 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	SLCO5A1	Q9H2Y9	848 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	SLC25A19	Q9HC21	320 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	IMPAD1	Q9NX62	359 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	KLHL21	Q9UJP4	597 aa		11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	ZNF346	Q9UL40	294 aa	Known RBP	11.1	□□□□□ -0.63
ABCD4-223	ENST00000555904	COL6A6	A6NMZ7	2263 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904		H0YJX3	145 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	AHCYL1	O43865	530 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	CNOT4	O95628	575 aa	Known RBP	11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	TXNDC12	O95881	172 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	REN	P00797	406 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	CD8B	P10966	210 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	KIR2DL2	P43627	348 aa	Predicted RBP	11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	OR3A2	P47893	321 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	HSPA13	P48723	471 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	CDC42	P60953	191 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	CDK5	Q00535	292 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	SLC35F1	Q5T1Q4	408 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	ARMC4	Q5T2S8	1044 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	VWA1	Q6PCB0	445 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	DNM1P34	Q6PK57	102 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	NUFIP2	Q7Z417	695 aa	Known RBP	11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	OR52E2	Q8NGJ4	325 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	ZNF519	Q8TB69	540 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	CA5BP1	Q8WTZ4	195 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	CYGB	Q8WWM9	190 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	RASD2	Q96D21	266 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	LRRC46	Q96FV0	321 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	RBP7	Q96R05	134 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	ULBP2	Q9BZM5	246 aa		11.09	□□□□□ -0.63
ABCD4-223	ENST00000555904	ASB6	Q9NWX5	421 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms