RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 TRABD2BA6NFA1 517 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 K7EQG2 157 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 RFXANKO14593 260 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 CLDN1O95832 211 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 IGHG1P01857 330 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 DCNP07585 359 aaKnown RBP4.15□□□□□ -1.75
VRK1-203ENST00000555067 IL32P24001 234 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 ACVR1BP36896 505 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 PTGDSP41222 190 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 ELK3P41970 407 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 GPR1P46091 355 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 GPX6P59796 221 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 TSC22D1Q15714 1073 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 LCLAT1Q6UWP7 414 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 FRRS1Q6ZNA5 592 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 FRA10AC1Q70Z53 315 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 ARCQ7LC44 396 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 CRYGNQ8WXF5 182 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 ANP32BQ92688 251 aaKnown RBP4.15□□□□□ -1.75
VRK1-203ENST00000555067 ISOC2Q96AB3 205 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 APH1AQ96BI3 265 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 ECSITQ9BQ95 431 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 TM2D1Q9BX74 207 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 UPF3BQ9BZI7 483 aaKnown RBP4.15□□□□□ -1.75
VRK1-203ENST00000555067 PIGUQ9H490 435 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 ZNF385DQ9H6B1 395 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 SPHK2Q9NRA0 654 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 MS4A12Q9NXJ0 267 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 B3GNT2Q9NY97 397 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 EURLQ9NYK6 297 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 UXTQ9UBK9 157 aaPredicted RBP4.15□□□□□ -1.75
VRK1-203ENST00000555067 RIMS3Q9UJD0 308 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 MGAT4AQ9UM21 535 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 SLC22A14Q9Y267 594 aa4.15□□□□□ -1.75
VRK1-203ENST00000555067 TRGV8A0A0C4DH27 118 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 LOC100131303A0A0U1RQF7 123 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 TFECO14948 347 aaPredicted RBP4.14□□□□□ -1.75
VRK1-203ENST00000555067 GPAA1O43292 621 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 CALUO43852 315 aaPredicted RBP4.14□□□□□ -1.75
VRK1-203ENST00000555067 FGGP02679 453 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 GLAP06280 429 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 KRT16P08779 473 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 PVRP15151 417 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 CTRB1P17538 263 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 NPR2P20594 1047 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 PRKACGP22612 351 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 FASP25445 335 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 CRATP43155 626 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 FBXW4P57775 412 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 MYL6P60660 151 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 SKP1P63208 163 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 MS4A2Q01362 244 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 PUDPQ08623 228 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 KCNJ11Q14654 390 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 PSG3Q16557 428 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 CTRB2Q6GPI1 263 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 TRMT10CQ7L0Y3 403 aaKnown RBP4.14□□□□□ -1.75
VRK1-203ENST00000555067 TIPARPQ7Z3E1 657 aaKnown RBP4.14□□□□□ -1.75
VRK1-203ENST00000555067 NKAIN4Q8IVV8 208 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 OR56B4Q8NH76 319 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 C11orf45Q8TAV5 145 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 SSC4DQ8WTU2 575 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 GTF3AQ92664 365 aaKnown RBP4.14□□□□□ -1.75
VRK1-203ENST00000555067 CCDC124Q96CT7 223 aaKnown RBP4.14□□□□□ -1.75
VRK1-203ENST00000555067 CPB2Q96IY4 423 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 NAPGQ99747 312 aaPredicted RBP4.14□□□□□ -1.75
VRK1-203ENST00000555067 LRRC61Q9BV99 259 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 MAP1LC3CQ9BXW4 147 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 NAA50Q9GZZ1 169 aaKnown RBP4.14□□□□□ -1.75
VRK1-203ENST00000555067 UPF3AQ9H1J1 476 aaKnown RBP4.14□□□□□ -1.75
VRK1-203ENST00000555067 CWH43Q9H720 699 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 DMAP1Q9NPF5 467 aaPredicted RBP4.14□□□□□ -1.75
VRK1-203ENST00000555067 EXOSC3Q9NQT5 275 aaKnown RBP4.14□□□□□ -1.75
VRK1-203ENST00000555067 STMN3Q9NZ72 180 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 RARRES3Q9UL19 164 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 SAMD4AQ9UPU9 718 aaKnown RBP4.14□□□□□ -1.75
VRK1-203ENST00000555067 L3MBTL1Q9Y468 752 aa4.14□□□□□ -1.75
VRK1-203ENST00000555067 A0A1B0GW15 77 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 FAM231BA6NCW3 169 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 RSPH10B2B2RC85 870 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 SLC19A2O60779 497 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 SCN2BO60939 215 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 HSBP1O75506 76 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 SCRG1O75711 98 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 ERLIN2O94905 339 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 CLIC3O95833 236 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 CD55P08174 381 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 RSPH10BP0C881 870 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 IGFBP5P24593 272 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 IL12AP29459 219 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 CALCRP30988 508 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 SLC26A3P40879 764 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 YAP1P46937 504 aaKnown RBP4.13□□□□□ -1.75
VRK1-203ENST00000555067 OR1D4P47884 311 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 HNRNPA3P51991 378 aaKnown RBP4.13□□□□□ -1.75
VRK1-203ENST00000555067 GSCP56915 257 aaPredicted RBP4.13□□□□□ -1.75
VRK1-203ENST00000555067 UBE2IP63279 158 aaKnown RBP4.13□□□□□ -1.75
VRK1-203ENST00000555067 PAX2Q02962 417 aa4.13□□□□□ -1.75
VRK1-203ENST00000555067 ELAVL2Q12926 359 aaKnown RBP4.13□□□□□ -1.75
VRK1-203ENST00000555067 SERTAD2Q14140 314 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms