RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 SLC17A5Q9NRA2 495 aa20.69■□□□□ 0.9
TDP1-205ENST00000553527 LAMP3Q9UQV4 416 aa20.69■□□□□ 0.9
TDP1-205ENST00000553527 OR6C65A6NJZ3 312 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 OR6A2O95222 327 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 H1F0P07305 194 aaKnown RBP20.68■□□□□ 0.9
TDP1-205ENST00000553527 ADORA3P0DMS8 318 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 CD99P14209 185 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 RBM34P42696 430 aaKnown RBP20.68■□□□□ 0.9
TDP1-205ENST00000553527 SPIBQ01892 262 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 ROR2Q01974 943 aaKnown RBP20.68■□□□□ 0.9
TDP1-205ENST00000553527 POU3F1Q03052 451 aaPredicted RBP20.68■□□□□ 0.9
TDP1-205ENST00000553527 IQCCQ4KMZ1 466 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 KLHL24Q6TFL4 600 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 TMEM108Q6UXF1 575 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 SSX8Q7RTT4 187 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 GPR137CQ8N3F9 429 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 LRRC17Q8N6Y2 441 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 SCAIQ8N9R8 606 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 PIK3C3Q8NEB9 887 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 C1orf162Q8NEQ5 155 aaPredicted RBP20.68■□□□□ 0.9
TDP1-205ENST00000553527 WFDC11Q8NEX6 87 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 TMEM255BQ8WV15 326 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 TMEM171Q8WVE6 324 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 FBXW5Q969U6 566 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 TXNDC15Q96J42 360 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 ZNF426Q9BUY5 554 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 NMNAT1Q9HAN9 279 aaPredicted RBP20.68■□□□□ 0.9
TDP1-205ENST00000553527 MAN2C1Q9NTJ4 1040 aa20.68■□□□□ 0.9
TDP1-205ENST00000553527 MRPL39Q9NYK5 338 aaKnown RBP20.68■□□□□ 0.9
TDP1-205ENST00000553527 A0A096LPE4 126 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 A0A1W2PPZ6 126 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 PLPP3O14495 311 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 FZD7O75084 574 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 ZNF432O94892 652 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 MT-ATP6P00846 226 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 PRPS1P60891 318 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 PUDPQ08623 228 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 CCNIQ14094 377 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 ZNF672Q499Z4 452 aaPredicted RBP20.67■□□□□ 0.9
TDP1-205ENST00000553527 FGD3Q5JSP0 725 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 ADPRHL1Q8NDY3 354 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 OR1K1Q8NGR3 316 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 OR5J2Q8NH18 312 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 TMEM239Q8WW34 195 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 HS6ST2Q96MM7 605 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 LINC00470Q9BZP3 86 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 SLC19A3Q9BZV2 496 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 ANKRD19PQ9H560 264 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 NANSQ9NR45 359 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 MED29Q9NX70 200 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 POU2F3Q9UKI9 436 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 RCE1Q9Y256 329 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 AMDHD2Q9Y303 409 aa20.67■□□□□ 0.9
TDP1-205ENST00000553527 USF3Q68DE3 2245 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 VPS13CQ709C8 3753 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 LOC102725191A0A1B0GVB3 256 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 M0R3G1 203 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 TRAF3IP2O43734 574 aaPredicted RBP20.66■□□□□ 0.9
TDP1-205ENST00000553527 AKAP8O43823 692 aaKnown RBP20.66■□□□□ 0.9
TDP1-205ENST00000553527 HIST1H2ABP04908 130 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 CD40P25942 277 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 UGT2B15P54855 530 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 SMIM11AP58511 58 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 SPOCK1Q08629 439 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 ZNF74Q16587 644 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 SLC22A25Q6T423 547 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 HIST3H2AQ7L7L0 130 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 C17orf78Q8N4C9 275 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 SMAP2Q8WU79 429 aaPredicted RBP20.66■□□□□ 0.9
TDP1-205ENST00000553527 HIST1H2ACQ93077 130 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 OR2M2Q96R28 347 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 CHID1Q9BWS9 393 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 YY1AP1Q9H869 796 aa20.66■□□□□ 0.9
TDP1-205ENST00000553527 CISD1Q9NZ45 108 aaKnown RBP20.66■□□□□ 0.9
TDP1-205ENST00000553527 A0A1W2PRQ8 180 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 SLC35F4A4IF30 521 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 ZNF726A6NNF4 738 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 SHISA9B4DS77 424 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 ARHGEF9O43307 516 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 WNT11O96014 354 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 FUT4P22083 530 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 PTAFRP25105 342 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 RRM2P31350 389 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 TUBA1BP68363 451 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 TUBA4AP68366 448 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 CAMK2DQ13557 499 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 DGCR6Q14129 220 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 KPNB1Q14974 876 aaKnown RBP20.65■□□□□ 0.9
TDP1-205ENST00000553527 TBRG1Q3YBR2 411 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 PHYHD1Q5SRE7 291 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 TUBA1AQ71U36 451 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 ACOT11Q8WXI4 607 aaPredicted RBP20.65■□□□□ 0.9
TDP1-205ENST00000553527 DHRS1Q96LJ7 313 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 GPR35Q9HC97 309 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 MED31Q9Y3C7 131 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 NOX1Q9Y5S8 564 aa20.65■□□□□ 0.9
TDP1-205ENST00000553527 FKBP6O75344 327 aa20.64■□□□□ 0.89
TDP1-205ENST00000553527 GADD45GO95257 159 aa20.64■□□□□ 0.89
TDP1-205ENST00000553527 CDH11P55287 796 aa20.64■□□□□ 0.89
TDP1-205ENST00000553527 UBE2NP61088 152 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms