RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 ADH7P40394 386 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 SLC25A1P53007 311 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 TBC1D3CQ6IPX1 549 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 ANKRD16Q6P6B7 361 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 ENPP7Q6UWV6 458 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 TBC1D3Q8IZP1 549 aaPredicted RBP15.98■□□□□ 0.15
SYNE3-202ENST00000553340 OR6K3Q8NGY3 331 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 ASB13Q8WXK3 278 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 FGF13Q92913 245 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 FBXW5Q969U6 566 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 PMEPA1Q969W9 287 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 EXOSC3Q9NQT5 275 aaKnown RBP15.98■□□□□ 0.15
SYNE3-202ENST00000553340 ZNF346Q9UL40 294 aaKnown RBP15.98■□□□□ 0.15
SYNE3-202ENST00000553340 OR6C74A6NCV1 312 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 NUPL2O15504 423 aaKnown RBP15.98■□□□□ 0.15
SYNE3-202ENST00000553340 PLRG1O43660 514 aaKnown RBP15.98■□□□□ 0.15
SYNE3-202ENST00000553340 CSTAP01040 98 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 GTF2F2P13984 249 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 RPA2P15927 270 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 ACTR1BP42025 376 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 ACTR1AP61163 376 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 ZNF595Q8IYB9 648 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 OR51S1Q8NGJ8 323 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 CCL4L1Q8NHW4 92 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 OR1E3Q8WZA6 343 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 TMEM106AQ96A25 262 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 DMRTA2Q96SC8 542 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 COMMD4Q9H0A8 199 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 GPR160Q9UJ42 338 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 IKZF2Q9UKS7 526 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 A0A1B0GW55 424 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 SPDEFO95238 335 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 DUX4L2P0CJ85 424 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 DUX4L3P0CJ86 424 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 DUX4L4P0CJ87 422 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 DUX4L5P0CJ88 424 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 DUX4L6P0CJ89 424 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 DUX4L7P0CJ90 424 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 GRK6P43250 576 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 ENPP2Q13822 863 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 C4orf46Q504U0 113 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 ZNF676Q8N7Q3 588 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 SLC19A3Q9BZV2 496 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 APMAPQ9HDC9 416 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 DUX4Q9UBX2 424 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 PCOLCE2Q9UKZ9 415 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 C4orf47A7E2U8 309 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 NPIPB9F8W1W9 429 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 ZNF254O75437 659 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 CTAG2O75638 210 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 ABHD16AO95870 558 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 ICAM2P13598 275 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 PVRP15151 417 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 AQP2P41181 271 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 PSMD4P55036 377 aaKnown RBP15.97■□□□□ 0.15
SYNE3-202ENST00000553340 SORDQ00796 357 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 PELOQ9BRX2 385 aaKnown RBP15.97■□□□□ 0.15
SYNE3-202ENST00000553340 EXO5Q9H790 373 aa15.97■□□□□ 0.15
SYNE3-202ENST00000553340 TRBV5-7A0A0A0MS05 114 aa15.96■□□□□ 0.15
SYNE3-202ENST00000553340 POM121BA6NF01 834 aa15.96■□□□□ 0.15
SYNE3-202ENST00000553340 OR4C45A6NMZ5 311 aa15.96■□□□□ 0.15
SYNE3-202ENST00000553340 HPP00738 406 aa15.96■□□□□ 0.15
SYNE3-202ENST00000553340 APODP05090 189 aa15.96■□□□□ 0.15
SYNE3-202ENST00000553340 CSRP1P21291 193 aaKnown RBP15.96■□□□□ 0.15
SYNE3-202ENST00000553340 S1PR1P21453 382 aa15.96■□□□□ 0.15
SYNE3-202ENST00000553340 CSF2RBP32927 897 aa15.96■□□□□ 0.15
SYNE3-202ENST00000553340 ZMYND11Q15326 602 aa15.96■□□□□ 0.15
SYNE3-202ENST00000553340 MANEAQ5SRI9 462 aa15.96■□□□□ 0.15
SYNE3-202ENST00000553340 OR51D1Q8NGF3 324 aa15.96■□□□□ 0.15
SYNE3-202ENST00000553340 OR8K3Q8NH51 312 aa15.96■□□□□ 0.15
SYNE3-202ENST00000553340 GPR148Q8TDV2 347 aa15.96■□□□□ 0.15
SYNE3-202ENST00000553340 C3orf49Q96BT1 292 aa15.96■□□□□ 0.15
SYNE3-202ENST00000553340 G6PC3Q9BUM1 346 aa15.96■□□□□ 0.15
SYNE3-202ENST00000553340 SLC25A32Q9H2D1 315 aa15.96■□□□□ 0.15
SYNE3-202ENST00000553340 SRA1Q9HD15 236 aaKnown RBP15.96■□□□□ 0.15
SYNE3-202ENST00000553340 LAMP5Q9UJQ1 280 aa15.96■□□□□ 0.15
SYNE3-202ENST00000553340 MKI67P46013 3256 aaKnown RBP15.96■□□□□ 0.15
SYNE3-202ENST00000553340 A0A1B0GTH9 108 aa15.96■□□□□ 0.14
SYNE3-202ENST00000553340 TMEM272A0A1B0GTI8 110 aa15.96■□□□□ 0.14
SYNE3-202ENST00000553340 CD14P08571 375 aa15.96■□□□□ 0.14
SYNE3-202ENST00000553340 MPGP29372 298 aa15.96■□□□□ 0.14
SYNE3-202ENST00000553340 RAB38P57729 211 aa15.96■□□□□ 0.14
SYNE3-202ENST00000553340 GUCA2AQ02747 115 aa15.96■□□□□ 0.14
SYNE3-202ENST00000553340 MELKQ14680 651 aa15.96■□□□□ 0.14
SYNE3-202ENST00000553340 YOD1Q5VVQ6 348 aaPredicted RBP15.96■□□□□ 0.14
SYNE3-202ENST00000553340 CDC20BQ86Y33 519 aa15.96■□□□□ 0.14
SYNE3-202ENST00000553340 C10orf53Q8N6V4 93 aa15.96■□□□□ 0.14
SYNE3-202ENST00000553340 EXD3Q8N9H8 876 aa15.96■□□□□ 0.14
SYNE3-202ENST00000553340 RCBTB1Q8NDN9 531 aa15.96■□□□□ 0.14
SYNE3-202ENST00000553340 OR2G2Q8NGZ5 317 aa15.96■□□□□ 0.14
SYNE3-202ENST00000553340 HRH3Q9Y5N1 445 aa15.96■□□□□ 0.14
SYNE3-202ENST00000553340 EML5Q05BV3 1969 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 TRAV18A0A075B6X5 111 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 SERINC4A6NH21 518 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 RFPL4AA6NLU0 287 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 TMEM212A6NML5 194 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 RFPL4AL1F8VTS6 287 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 H0YC42 278 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 APOC3P02656 99 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 RLN2P04090 185 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms