RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 LMF2Q9BU23 707 aaKnown RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 MRPL37Q9BZE1 423 aaKnown RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 RAB17Q9H0T7 212 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 SLC25A32Q9H2D1 315 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 DPAGT1Q9H3H5 408 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 TMEM165Q9HC07 324 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 CRLF2Q9HC73 371 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 HINT3Q9NQE9 182 aaKnown RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 SLC35C2Q9NQQ7 365 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 MMP26Q9NRE1 261 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 TPSG1Q9NRR2 321 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 SLCO1C1Q9NYB5 712 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 UBAP1Q9NZ09 502 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 GRHL1Q9NZI5 618 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 ZMAT5Q9UDW3 170 aaKnown RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 RAB21Q9UL25 225 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 SLC45A2Q9UMX9 530 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 PLA2G2DQ9UNK4 145 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 TRAPPC4Q9Y296 219 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 UTP11Q9Y3A2 253 aaKnown RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 SPIN1Q9Y657 262 aaPredicted RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 IGHV2OR16-5A0A0B4J2B6 119 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 A0A1W2PPW3 197 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 ISPDA4D126 451 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 C17orf100A8MU93 164 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 ZNF587BE7ETH6 402 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 J3KTA2 159 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 M0QYG6 137 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 ANKRD28O15084 1053 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 RAD51CO43502 376 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 IGKV3-15P01624 115 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 OR12D1P0DN82 309 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 PRPS2P11908 318 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 UQCRC2P22695 453 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 STX2P32856 288 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 TGFBR2P37173 567 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 ARL1P40616 181 aaPredicted RBP4.35□□□□□ -1.71
CKAP4-203ENST00000553039 FNTAP49354 379 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 SH3BGRP55822 239 aaPredicted RBP4.35□□□□□ -1.71
CKAP4-203ENST00000553039 TAS2R39P59534 338 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 VSNL1P62760 191 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 CCL8P80075 99 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 GALK2Q01415 458 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 GUCY2DQ02846 1103 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 EPS8Q12929 822 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 IFT88Q13099 833 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 CRYMQ14894 314 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 SEC23BQ15437 767 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 GALNTL6Q49A17 601 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 TIGD2Q4W5G0 525 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 SLC25A53Q5H9E4 307 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 GPR157Q5UAW9 335 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 FRG2Q64ET8 278 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 KRT80Q6KB66 452 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 C3orf33Q6P1S2 294 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 ZNF529Q6P280 563 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 CCDC137Q6PK04 289 aaKnown RBP4.35□□□□□ -1.71
CKAP4-203ENST00000553039 PAQR6Q6TCH4 344 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 AAED1Q7RTV5 226 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 PXKQ7Z7A4 578 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 CNPY4Q8N129 248 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 SPICQ8N5J4 248 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 EIF1ADQ8N9N8 165 aaKnown RBP4.35□□□□□ -1.71
CKAP4-203ENST00000553039 L3MBTL4Q8NA19 623 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 GATSQ8NAP1 163 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 OR1K1Q8NGR3 316 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 ABHD4Q8TB40 342 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 MGARPQ8TDB4 240 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 GRK7Q8WTQ7 553 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 ANKRD49Q8WVL7 239 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 CCL17Q92583 94 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 MAGOHBQ96A72 148 aaKnown RBP4.35□□□□□ -1.71
CKAP4-203ENST00000553039 EXOSC8Q96B26 276 aaKnown RBP4.35□□□□□ -1.71
CKAP4-203ENST00000553039 ELMOD3Q96FG2 381 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 CERS2Q96G23 380 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 C16orf58Q96GQ5 468 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 FRG2BQ96QU4 278 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 MRPL1Q9BYD6 325 aaKnown RBP4.35□□□□□ -1.71
CKAP4-203ENST00000553039 LAT2Q9GZY6 243 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 MUC13Q9H3R2 512 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 DENND2DQ9H6A0 471 aaPredicted RBP4.35□□□□□ -1.71
CKAP4-203ENST00000553039 MARCH7Q9H992 704 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 NANOGQ9H9S0 305 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 SIRT3Q9NTG7 399 aaPredicted RBP4.35□□□□□ -1.71
CKAP4-203ENST00000553039 DDX18Q9NVP1 670 aaKnown RBP4.35□□□□□ -1.71
CKAP4-203ENST00000553039 PPP1R14DQ9NXH3 145 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 NUDT4Q9NZJ9 180 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 OR5V1Q9UGF6 321 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 GRID1Q9ULK0 1009 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 HSF4Q9ULV5 492 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 HDGFL3Q9Y3E1 203 aa4.35□□□□□ -1.71
CKAP4-203ENST00000553039 IGHV3OR16-10A0A075B7F0 116 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 ZNF816-ZNF321PA0A0X1KG74 233 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 GXYLT2A0PJZ3 443 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 RBMY1BA6NDE4 496 aaKnown RBP4.34□□□□□ -1.71
CKAP4-203ENST00000553039 BTBD17A6NE02 478 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 RBMY1EA6NEQ0 496 aaKnown RBP4.34□□□□□ -1.71
CKAP4-203ENST00000553039 SYCE1LA8MT33 242 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 MYO1GB0I1T2 1018 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 B5MCH6 92 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms