RNA–Protein interactions for RNA: ENST00000552338.5

LIMA1-211, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-211ENST00000552338 FNDC9Q8TBE3 224 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 ROBO4Q8WZ75 1007 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 PTP4A1Q93096 173 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 TMEM54Q969K7 222 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 SLC25A44Q96H78 314 aaPredicted RBP8.51□□□□□ -1.05
LIMA1-211ENST00000552338 Q96M85 177 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 MUS81Q96NY9 551 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 ERMAPQ96PL5 475 aaPredicted RBP8.51□□□□□ -1.05
LIMA1-211ENST00000552338 SLC38A2Q96QD8 506 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 TSPAN32Q96QS1 320 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 APOL4Q9BPW4 351 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 ALG12Q9BV10 488 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 IFT27Q9BW83 186 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 LINC00470Q9BZP3 86 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 RIBC2Q9H4K1 309 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 Q9H521 79 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 MRPS18AQ9NVS2 196 aaKnown RBP8.51□□□□□ -1.05
LIMA1-211ENST00000552338 PARPBPQ9NWS1 579 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 HAO2Q9NYQ3 351 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 ZNF226Q9NYT6 803 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 GRHPRQ9UBQ7 328 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 GMPPBQ9Y5P6 360 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 IER3IP1Q9Y5U9 82 aa8.51□□□□□ -1.05
LIMA1-211ENST00000552338 DSPP15924 2871 aaKnown RBP8.51□□□□□ -1.05
LIMA1-211ENST00000552338 ESPL1Q14674 2120 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 PRSS37A4D1T9 235 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 SH3D21A4FU49 640 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 SLC35F4A4IF30 521 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 B8ZZF3 427 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 E9PLN8 166 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 C11orf98E9PRG8 122 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 RPL36A-HNRNPH2H7BZ11 118 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 M0R3G1 203 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 AKAP8O43823 692 aaKnown RBP8.5□□□□□ -1.05
LIMA1-211ENST00000552338 TRMUO75648 421 aaKnown RBP8.5□□□□□ -1.05
LIMA1-211ENST00000552338 TOXO94900 526 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 PPP1R3DO95685 299 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 IL18BPO95998 194 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 PGA4P0DJD7 388 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 PGA3P0DJD8 388 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 NR2C1P13056 603 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 IFNGR1P15260 489 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 ABOP16442 354 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 AHCYP23526 432 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 POU1F1P28069 291 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 RPL4P36578 427 aaKnown RBP8.5□□□□□ -1.05
LIMA1-211ENST00000552338 CDKN2AP42771 156 aaKnown RBP8.5□□□□□ -1.05
LIMA1-211ENST00000552338 CA7P43166 264 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 ERVK-25P63136 954 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 CSNK2BP67870 215 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 IL1RL1Q01638 556 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 POU3F1Q03052 451 aaPredicted RBP8.5□□□□□ -1.05
LIMA1-211ENST00000552338 NFATC3Q12968 1075 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 MAD2L1BPQ15013 274 aaPredicted RBP8.5□□□□□ -1.05
LIMA1-211ENST00000552338 C3AR1Q16581 482 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 MESTQ5EB52 335 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 THEM4Q5T1C6 240 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 AADACL4Q5VUY2 407 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 NXNL2Q5VZ03 156 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 CASP12Q6UXS9 341 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 THAP5Q7Z6K1 395 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 ZBTB46Q86UZ6 589 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 CD163Q86VB7 1156 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 ENTHD1Q8IYW4 607 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 C8orf59Q8N0T1 100 aaPredicted RBP8.5□□□□□ -1.05
LIMA1-211ENST00000552338 KDM8Q8N371 416 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 GALNT11Q8NCW6 608 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 TMEM163Q8TC26 289 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 ABHD3Q8WU67 409 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 ZNF566Q969W8 418 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 RELTQ969Z4 430 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 TXNDC15Q96J42 360 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 BBC3Q96PG8 261 aaPredicted RBP8.5□□□□□ -1.05
LIMA1-211ENST00000552338 ZNF385AQ96PM9 386 aaKnown RBP8.5□□□□□ -1.05
LIMA1-211ENST00000552338 DMRTA2Q96SC8 542 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 VKORC1Q9BQB6 163 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 TTYH2Q9BSA4 534 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 YTHDF1Q9BYJ9 559 aaKnown RBP8.5□□□□□ -1.05
LIMA1-211ENST00000552338 PLSCR4Q9NRQ2 329 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 PLCXD1Q9NUJ7 323 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 EMC3Q9P0I2 261 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 TNFRSF10DQ9UBN6 386 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 MOKQ9UQ07 419 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 ADAM18Q9Y3Q7 739 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 FKBP7Q9Y680 259 aa8.5□□□□□ -1.05
LIMA1-211ENST00000552338 IGHV3-15A0A0B4J1V0 119 aa8.49□□□□□ -1.05
LIMA1-211ENST00000552338 TEX13CA0A0J9YWL9 993 aa8.49□□□□□ -1.05
LIMA1-211ENST00000552338 SLC22A23A1A5C7 686 aa8.49□□□□□ -1.05
LIMA1-211ENST00000552338 TRIM64A6NGJ6 449 aa8.49□□□□□ -1.05
LIMA1-211ENST00000552338 KDM4EB2RXH2 506 aaPredicted RBP8.49□□□□□ -1.05
LIMA1-211ENST00000552338 PRODHO43272 600 aa8.49□□□□□ -1.05
LIMA1-211ENST00000552338 PRKYO43930 277 aa8.49□□□□□ -1.05
LIMA1-211ENST00000552338 WBP4O75554 376 aaKnown RBP8.49□□□□□ -1.05
LIMA1-211ENST00000552338 CGAP01215 116 aa8.49□□□□□ -1.05
LIMA1-211ENST00000552338 IFNGP01579 166 aa8.49□□□□□ -1.05
LIMA1-211ENST00000552338 TPOP07202 933 aa8.49□□□□□ -1.05
LIMA1-211ENST00000552338 GNAO1P09471 354 aa8.49□□□□□ -1.05
LIMA1-211ENST00000552338 SLC2A5P22732 501 aa8.49□□□□□ -1.05
LIMA1-211ENST00000552338 AGTR1P30556 359 aa8.49□□□□□ -1.05
LIMA1-211ENST00000552338 ACVR1BP36896 505 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms