RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 GTF2A1LQ9UNN4 478 aa4.55□□□□□ -1.68
HOXB3-213ENST00000552000 CCL27Q9Y4X3 112 aa4.55□□□□□ -1.68
HOXB3-213ENST00000552000 AUP1Q9Y679 476 aa4.55□□□□□ -1.68
HOXB3-213ENST00000552000 CACNG2Q9Y698 323 aa4.55□□□□□ -1.68
HOXB3-213ENST00000552000 EPPK1P58107 5090 aaKnown RBP4.55□□□□□ -1.68
HOXB3-213ENST00000552000 RYR2Q92736 4967 aa4.55□□□□□ -1.68
HOXB3-213ENST00000552000 IGHV1-69-2A0A0G2JMI3 117 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 MDFIC2A0A1B0GVS7 189 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 CLPSL1A2RUU4 121 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 CLDN24A6NM45 220 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 C17orf100A8MU93 164 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 G3V4G9 280 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 CFLARO15519 480 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 PIP5K1CO60331 668 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 HTR3BO95264 441 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 CLPTM1O96005 669 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 CRYBA1P05813 215 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 CHRM4P08173 479 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 GSTA1P08263 222 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 IGHV4-38-2P0DP08 117 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 CD79AP11912 226 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 ZNF35P13682 527 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 SOAT1P35610 550 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 HPCAL1P37235 193 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 PAFAH1B1P43034 410 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 CRYBB2P43320 205 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 MTNR1AP48039 350 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 SERPINB9P50453 376 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 P2RY4P51582 365 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 CLDN17P56750 224 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 RPL38P63173 70 aaKnown RBP4.54□□□□□ -1.68
HOXB3-213ENST00000552000 GALK2Q01415 458 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 TEKQ02763 1124 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 CAV1Q03135 178 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 PIGFQ07326 219 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 BNIP2Q12982 314 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 ZNF154Q13106 437 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 TAF9Q16594 264 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 CEACAM16Q2WEN9 425 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 TRMT5Q32P41 509 aaKnown RBP4.54□□□□□ -1.68
HOXB3-213ENST00000552000 BEAN1Q3B7T3 259 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 FAM153CQ494X1 144 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 PRAMEF8Q5VWM4 474 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 PRAMEF7Q5VXH5 474 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 CLEC6AQ6EIG7 209 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 TMEM154Q6P9G4 183 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 SYT10Q6XYQ8 523 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 CREB3L2Q70SY1 520 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 C16orf62Q7Z3J2 963 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 R3HCC1LQ7Z5L2 792 aaKnown RBP4.54□□□□□ -1.68
HOXB3-213ENST00000552000 SLC22A9Q8IVM8 553 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 CLEC4FQ8N1N0 589 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 KDM8Q8N371 416 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 GPR137CQ8N3F9 429 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 ARFGAP2Q8N6H7 521 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 OR2T11Q8NH01 316 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 SFXN5Q8TD22 340 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 MGARPQ8TDB4 240 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 ST7LQ8TDW4 575 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 SNX33Q8WV41 574 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 DCAKDQ8WVC6 231 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 OR5P2Q8WZ92 322 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 CNOT9Q92600 299 aaKnown RBP4.54□□□□□ -1.68
HOXB3-213ENST00000552000 GTF3AQ92664 365 aaKnown RBP4.54□□□□□ -1.68
HOXB3-213ENST00000552000 RAB1CQ92928 201 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 KTI12Q96EK9 354 aaPredicted RBP4.54□□□□□ -1.68
HOXB3-213ENST00000552000 L3HYPDHQ96EM0 354 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 METTL2AQ96IZ6 378 aaKnown RBP4.54□□□□□ -1.68
HOXB3-213ENST00000552000 FCRL1Q96LA6 429 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 TSPAN32Q96QS1 320 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 PAFAH2Q99487 392 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 GATA5Q9BWX5 397 aaPredicted RBP4.54□□□□□ -1.68
HOXB3-213ENST00000552000 TAPBPLQ9BX59 468 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 LINC00470Q9BZP3 86 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 GPR35Q9HC97 309 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 HINT3Q9NQE9 182 aaKnown RBP4.54□□□□□ -1.68
HOXB3-213ENST00000552000 B3GNT2Q9NY97 397 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 NINJ2Q9NZG7 142 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 ATP6V1HQ9UI12 483 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 LEF1Q9UJU2 399 aaPredicted RBP4.54□□□□□ -1.68
HOXB3-213ENST00000552000 PURGQ9UJV8 347 aaKnown RBP4.54□□□□□ -1.68
HOXB3-213ENST00000552000 SLC35A3Q9Y2D2 325 aa4.54□□□□□ -1.68
HOXB3-213ENST00000552000 PPIAL4EA0A075B759 164 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 PPIAL4CA0A0B4J2A2 164 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 PPIAL4DF5H284 164 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 POC1B-GALNT4F8VUJ3 575 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 TRAPPC2LH3BP13 241 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 RPL36A-HNRNPH2H7BZ11 118 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 SLC28A1O00337 649 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 HOXA3O43365 443 aaPredicted RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 FRS3O43559 492 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 TRAF3IP2O43734 574 aaPredicted RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 SLC43A1O75387 559 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 FOXH1O75593 365 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 VAMP5O95183 116 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 AK1P00568 194 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 PPIAL4FP0DN26 164 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 OR12D1P0DN82 309 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 SELEP16581 610 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 ZNF12P17014 697 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms