RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 SLC10A7Q0GE19 358 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 RBM39Q14498 530 aaKnown RBP4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 RSU1Q15404 277 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 HAGHQ16775 308 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 ZNF791Q3KP31 576 aaPredicted RBP4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 GXYLT1Q4G148 440 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 KHDC3LQ587J8 217 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 COA6Q5JTJ3 125 aaKnown RBP4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 ADGRF1Q5T601 910 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 C9orf64Q5T6V5 341 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 ZDHHC20Q5W0Z9 365 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 CYB5R2Q6BCY4 276 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 RAB12Q6IQ22 244 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 ZCCHC12Q6PEW1 402 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 PODNL1Q6PEZ8 512 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 ZNF613Q6PF04 617 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 DHRS11Q6UWP2 260 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 ENPP7Q6UWV6 458 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 LBX2Q6XYB7 198 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 ZNF852Q6ZMS4 543 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 LRRC70Q7Z2Q7 622 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 RABEPKQ7Z6M1 372 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 LRRTM1Q86UE6 522 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 MON1AQ86VX9 555 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 SLC35F3Q8IY50 421 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 MMP21Q8N119 569 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 GTPBP8Q8N3Z3 284 aaPredicted RBP4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 COMMD1Q8N668 190 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 CELF5Q8N6W0 485 aaKnown RBP4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 UBAC2Q8NBM4 344 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 B3GALNT2Q8NCR0 500 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 SLC24A4Q8NFF2 622 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 OR5T3Q8NGG3 340 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 OR51S1Q8NGJ8 323 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 OR6T1Q8NGN1 323 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 OR13D1Q8NGV5 346 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 NFKBIDQ8NI38 313 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 ADAMTS17Q8TE56 1095 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 DNASE2BQ8WZ79 361 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 MRPS31Q92665 395 aaKnown RBP4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 RSC1A1Q92681 617 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 RFKQ969G6 155 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 MUCL1Q96DR8 90 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 FAM210BQ96KR6 192 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 MRGPRX4Q96LA9 322 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 APOLD1Q96LR9 279 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 TGM7Q96PF1 710 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 PKP4Q99569 1192 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 ZFYVE21Q9BQ24 234 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 PIGQQ9BRB3 760 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 MRI1Q9BV20 369 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 SNHG12Q9BXW3 62 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 PLA2G12AQ9BZM1 189 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 ABCG8Q9H221 673 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 SYT4Q9H2B2 425 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 RHBGQ9H310 441 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 TMEM185BQ9H7F4 350 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 ISG20L2Q9H9L3 353 aaKnown RBP4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 IL21RQ9HBE5 538 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 CSNK1G1Q9HCP0 422 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 MYOZ2Q9NPC6 264 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 GLRX2Q9NS18 164 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 MARCH5Q9NX47 278 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 WWOXQ9NZC7 414 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 CALML5Q9NZT1 146 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 MARCH2Q9P0N8 246 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 DOK5Q9P104 306 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 PTGFRNQ9P2B2 879 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 MTFP1Q9UDX5 166 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 PPIL1Q9Y3C6 166 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 OR10H1Q9Y4A9 318 aa4.82□□□□□ -1.64
LSM3P2-201ENST00000551246 PLXNA1Q9UIW2 1896 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 CCDC163A0A0D9SF12 145 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 A0A1W2PN81 502 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 hCG_1809904A0A1W2PP81 198 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 A0A1W2PR64 198 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 A0A1W2PRV1 198 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 CPED1A4D0V7 1026 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 OR52A4PA6NMU1 304 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 DRGXA6NNA5 263 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 C9J4A7 227 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 H7BY64 318 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 HRKO00198 91 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 SURF4O15260 269 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 XRCC3O43542 346 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 PIP5K1CO60331 668 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 TLR5O60602 858 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 TBX19O60806 448 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 STK16O75716 305 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 GLSO94925 669 aaPredicted RBP4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 LRATO95237 230 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 VNN2O95498 520 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 PRAMEF12O95522 483 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 PLGP00747 810 aaPredicted RBP4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 MT-ND5P03915 603 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 RAB40ALP0C0E4 278 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 CALCBP10092 127 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 TXNP10599 105 aaKnown RBP4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 COX7A2P14406 83 aa4.81□□□□□ -1.64
LSM3P2-201ENST00000551246 CSF2RAP15509 400 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms