RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 HIKESHIQ53FT3 197 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 CARD17Q5XLA6 110 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 MBOAT2Q6ZWT7 520 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 TRPM8Q7Z2W7 1104 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 HDDC2Q7Z4H3 204 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 NRMQ8IXM6 262 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 FAM86B1Q8N7N1 296 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 ZNF611Q8N823 705 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 OR6N1Q8NGY5 312 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 BCL2L2Q92843 193 aaPredicted RBP13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 PIGTQ969N2 578 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 BPIFA2Q96DR5 249 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 C7orf34Q96L11 122 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 PIP5K1AQ99755 562 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 NELFAQ9H3P2 528 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 MUC13Q9H3R2 512 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 NMNAT1Q9HAN9 279 aaPredicted RBP13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 CRLF2Q9HC73 371 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 ACTR3BQ9P1U1 418 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 STX18Q9P2W9 335 aaKnown RBP13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 PRPF19Q9UMS4 504 aaKnown RBP13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 HIF3AQ9Y2N7 669 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 HRNRQ86YZ3 2850 aaPredicted RBP13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 A0A087WUU8 490 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 A0A1W2PR80 420 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 A0A1W2PRG6 482 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 ZNF99A8MXY4 864 aaPredicted RBP13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 CENPBD1B2RD01 187 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 BLOC1S5-TXNDC5H3BN57 136 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 M0R3G1 203 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 BCL10O95999 233 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 FUT4P22083 530 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 CD40P25942 277 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 MSX2P35548 267 aaPredicted RBP13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 AQP2P41181 271 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 SLC9A3P48764 834 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 DAP3P51398 398 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 ZNF83P51522 516 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 UBE2NP61088 152 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 RPS4XP62701 263 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 LSM11P83369 360 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 VLDLRP98155 873 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 FOXD4Q12950 439 aaPredicted RBP13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 CAMK2DQ13557 499 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 MTX3Q5HYI7 312 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 ZNF730Q6ZMV8 503 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 KBTBD8Q8NFY9 601 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 AKAP1Q92667 903 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 ZNF566Q969W8 418 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 MCUR1Q96AQ8 359 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 SLC25A44Q96H78 314 aaPredicted RBP13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 DHRS1Q96LJ7 313 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 CCL19Q99731 98 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 ULBP2Q9BZM5 246 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 C1orf21Q9H246 121 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 INIPQ9NRY2 104 aa13.49□□□□□ -0.25
PRPF40B-211ENST00000551063 CADP27708 2225 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 M0R1B8 84 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 ABCD4O14678 606 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 IGHG1P01857 330 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 SAGP10523 405 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 ARF1P84077 181 aaKnown RBP13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 MELKQ14680 651 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 ZNF672Q499Z4 452 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 IQCCQ4KMZ1 466 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 ALG10Q5BKT4 473 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 PHYHD1Q5SRE7 291 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 ZNF627Q7L945 461 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 WDFY1Q8IWB7 410 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 CCDC36Q8IYA8 594 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 FAM169BQ8N8A8 192 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 SLC7A13Q8TCU3 470 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 TMEM54Q969K7 222 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 FBXW5Q969U6 566 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 ZNF837Q96EG3 531 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 TMUB1Q9BVT8 246 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 GLTPQ9NZD2 209 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 TMEM5Q9Y2B1 443 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 V9GYQ6 96 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 ALPK2Q86TB3 2170 aa13.48□□□□□ -0.25
PRPF40B-211ENST00000551063 EFCAB9A8MZ26 197 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 SHISA9B4DS77 424 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 MCIDASD6RGH6 385 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 hCG_2039718K7EN88 272 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 F13BP05160 661 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 FABP3P05413 133 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 PGA4P0DJD7 388 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 PGA3P0DJD8 388 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 MAKP20794 623 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 ATP6V1B2P21281 511 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 CDH11P55287 796 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 SMIM11AP58511 58 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 TAF11Q15544 211 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 C3orf36Q3SXR2 165 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 FGD3Q5JSP0 725 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 LCN8Q6JVE9 175 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 RINLQ6ZS11 566 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 TMPRSS11FQ6ZWK6 438 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 RRM2BQ7LG56 351 aa13.47□□□□□ -0.25
PRPF40B-211ENST00000551063 TGIF2LYQ8IUE0 185 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms