RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 ANKS4BQ8N8V4 417 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 OR4F15Q8NGB8 312 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 C10orf105Q8TEF2 133 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 LRRC58Q96CX6 371 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 LRR1Q96L50 414 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 TNFRSF13CQ96RJ3 184 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 VRK1Q99986 396 aaPredicted RBP14.17□□□□□ -0.14
VPS29-207ENST00000549970 ULBP2Q9BZM5 246 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 POFUT2Q9Y2G5 429 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 CUBNO60494 3623 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 IGHV2OR16-5A0A0B4J2B6 119 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 FXYD1O00168 92 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 PDE5AO76074 875 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 HLA-HP01893 362 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 CSF3P09919 207 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 UMPSP11172 480 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 CD79AP11912 226 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 IFNGR1P15260 489 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 B4GALT1P15291 398 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 THBS4P35443 961 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 CSNK1A1P48729 337 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 BIDP55957 195 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 HGFACQ04756 655 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 LOXL1Q08397 574 aaPredicted RBP14.16□□□□□ -0.14
VPS29-207ENST00000549970 KLF10Q13118 480 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 CCDC36Q8IYA8 594 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 NUP37Q8NFH4 326 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 RASSF5Q8WWW0 418 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 PROX1Q92786 737 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 SH3GL1Q99961 368 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 ECSITQ9BQ95 431 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 NANSQ9NR45 359 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 SH3GLB1Q9Y371 365 aa14.16□□□□□ -0.14
VPS29-207ENST00000549970 MRASO14807 208 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 RNF13O43567 381 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 VIMP08670 466 aaKnown RBP14.15□□□□□ -0.14
VPS29-207ENST00000549970 TNFRSF1BP20333 461 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 PDLIM4P50479 330 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 PIGFQ07326 219 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 EFNB3Q15768 340 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 CARTPTQ16568 116 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 GSG1Q2KHT4 349 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 CGB2Q6NT52 195 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 CCDC80Q76M96 950 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 CARM1Q86X55 608 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 SNX32Q86XE0 403 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 LRRC17Q8N6Y2 441 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 OR8J3Q8NGG0 315 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 MS4A3Q96HJ5 214 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 MPP4Q96JB8 637 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 FOXB1Q99853 325 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 PCDHAC1Q9H158 963 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 PLK3Q9H4B4 646 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 NOX3Q9HBY0 568 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 SAR1AQ9NR31 198 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 MRGBPQ9NV56 204 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 B3GNT2Q9NY97 397 aa14.15□□□□□ -0.14
VPS29-207ENST00000549970 YLPM1P49750 1951 aaKnown RBP14.14□□□□□ -0.15
VPS29-207ENST00000549970 LOC100653049A0A140TA62 436 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 BBIP1A8MTZ0 92 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 A8MV72 311 aaPredicted RBP14.14□□□□□ -0.15
VPS29-207ENST00000549970 hCG_2039718K7EN88 272 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 SHOX2O60902 331 aaPredicted RBP14.14□□□□□ -0.15
VPS29-207ENST00000549970 KRT34O76011 436 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 SNTB2Q13425 540 aaKnown RBP14.14□□□□□ -0.15
VPS29-207ENST00000549970 MELKQ14680 651 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 MAPRE2Q15555 327 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 COQ5Q5HYK3 327 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 C6orf52Q5T4I8 152 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 KRT80Q6KB66 452 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 DEF8Q6ZN54 512 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 SLC35D2Q76EJ3 337 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 SPATA21Q7Z572 469 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 CALHM3Q86XJ0 350 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 SVOPLQ8N434 492 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 IL17RDQ8NFM7 739 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 PRSS27Q9BQR3 290 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 ZNF426Q9BUY5 554 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 ZNF442Q9H7R0 627 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 TAS2R5Q9NYW4 299 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 ZNF229Q9UJW7 825 aa14.14□□□□□ -0.15
VPS29-207ENST00000549970 VSTM5A8MXK1 200 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 HIST1H2ABP04908 130 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 NPR2P20594 1047 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 USF1P22415 310 aaPredicted RBP14.13□□□□□ -0.15
VPS29-207ENST00000549970 PTDSS1P48651 473 aaKnown RBP14.13□□□□□ -0.15
VPS29-207ENST00000549970 PPOXP50336 477 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 TAS2R41P59536 307 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 VLDLRP98155 873 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 ZP4Q12836 540 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 DAG1Q14118 895 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 GGTLC2Q14390 218 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 HIST3H2AQ7L7L0 130 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 ZNF627Q7L945 461 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 NANOGNBQ7Z5D8 188 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 OR6X1Q8NH79 312 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 HIST1H2ACQ93077 130 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 TMEM54Q969K7 222 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 MDFIQ99750 246 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 PIMREGQ9BSJ6 248 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms