RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 MT-ATP6P00846 226 aa11.62□□□□□ -0.55
GCN1-206ENST00000549815 PCGF2P35227 344 aa11.62□□□□□ -0.55
GCN1-206ENST00000549815 ZP4Q12836 540 aa11.62□□□□□ -0.55
GCN1-206ENST00000549815 NPRL3Q12980 569 aa11.62□□□□□ -0.55
GCN1-206ENST00000549815 CAMK2DQ13557 499 aa11.62□□□□□ -0.55
GCN1-206ENST00000549815 NFYCQ13952 458 aa11.62□□□□□ -0.55
GCN1-206ENST00000549815 ZNF74Q16587 644 aa11.62□□□□□ -0.55
GCN1-206ENST00000549815 CYP51A1Q16850 503 aa11.62□□□□□ -0.55
GCN1-206ENST00000549815 MSMPQ1L6U9 139 aa11.62□□□□□ -0.55
GCN1-206ENST00000549815 METTL21CQ5VZV1 264 aa11.62□□□□□ -0.55
GCN1-206ENST00000549815 PATL1Q86TB9 770 aaKnown RBP11.62□□□□□ -0.55
GCN1-206ENST00000549815 SLC30A8Q8IWU4 369 aa11.62□□□□□ -0.55
GCN1-206ENST00000549815 OR5J2Q8NH18 312 aa11.62□□□□□ -0.55
GCN1-206ENST00000549815 OR10A6Q8NH74 314 aa11.62□□□□□ -0.55
GCN1-206ENST00000549815 PRSS27Q9BQR3 290 aa11.62□□□□□ -0.55
GCN1-206ENST00000549815 TAS2R5Q9NYW4 299 aa11.62□□□□□ -0.55
GCN1-206ENST00000549815 TRIM33Q9UPN9 1127 aa11.62□□□□□ -0.55
GCN1-206ENST00000549815 ANK2Q01484 3957 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 LOC390937A0A1W2PQ73 354 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 SASH3O75995 380 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 HLA-HP01893 362 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 ZNF35P13682 527 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 ZNF14P17017 642 aaPredicted RBP11.61□□□□□ -0.55
GCN1-206ENST00000549815 ZNF16P17020 682 aaPredicted RBP11.61□□□□□ -0.55
GCN1-206ENST00000549815 NR4A2P43354 598 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 LSM11P83369 360 aaKnown RBP eCLIP11.61□□□□□ -0.552e-9■□□□□ 9.7
GCN1-206ENST00000549815 CHRFAM7AQ494W8 412 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 CYB5R2Q6BCY4 276 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 NANOGP8Q6NSW7 305 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 PODNL1Q6PEZ8 512 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 ZNF813Q6ZN06 617 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 CCDC80Q76M96 950 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 SLC46A3Q7Z3Q1 461 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 IL17RDQ8NFM7 739 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 SPATA3Q8NHX4 192 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 ADAMTS16Q8TE57 1224 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 TMEM54Q969K7 222 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 FOXN4Q96NZ1 517 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 FOXB1Q99853 325 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 VRK1Q99986 396 aaPredicted RBP11.61□□□□□ -0.55
GCN1-206ENST00000549815 NANOGQ9H9S0 305 aa11.61□□□□□ -0.55
GCN1-206ENST00000549815 MYOZ1Q9NP98 299 aaPredicted RBP11.61□□□□□ -0.55
GCN1-206ENST00000549815 IGHV4-61A0A0C4DH41 118 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 A0A0G2JND7 137 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 ZNF726A6NNF4 738 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 C11orf98E9PRG8 122 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 hCG_2039718K7EN88 272 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 FXYD1O00168 92 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 STAMBPO95630 424 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 ADORA3P0DMS8 318 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 B4GALT1P15291 398 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 NPR2P20594 1047 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 AHCYP23526 432 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 CAPZA2P47755 286 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 BIDP55957 195 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 GGTLC2Q14390 218 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 GSG1Q2KHT4 349 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 VMACQ2NL98 169 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 CALHM3Q86XJ0 350 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 SVOPLQ8N434 492 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 C10orf53Q8N6V4 93 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 LRRC17Q8N6Y2 441 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 OR6X1Q8NH79 312 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 VANGL1Q8TAA9 524 aaPredicted RBP11.6□□□□□ -0.55
GCN1-206ENST00000549815 MS4A3Q96HJ5 214 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 MPP4Q96JB8 637 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 KCNK17Q96T54 332 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 PIMREGQ9BSJ6 248 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 ULBP2Q9BZM5 246 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 B3GAT2Q9NPZ5 323 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 FBXO9Q9UK97 447 aaPredicted RBP11.6□□□□□ -0.55
GCN1-206ENST00000549815 POFUT2Q9Y2G5 429 aa11.6□□□□□ -0.55
GCN1-206ENST00000549815 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.6□□□□□ -0.552e-7■■■■■ 29.2
GCN1-206ENST00000549815 STAB1Q9NY15 2570 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 TRAPPC13A5PLN9 417 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 SERPINI2O75830 405 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 CH25HO95992 272 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 ASAH2BP0C7U1 165 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 FAM157CP0CG43 387 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 IFNGR1P15260 489 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 NR4A1P22736 598 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 CSNK1A1P48729 337 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 GZMKP49863 264 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 SNTB2Q13425 540 aaKnown RBP11.59□□□□□ -0.55
GCN1-206ENST00000549815 DAG1Q14118 895 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 TRMT5Q32P41 509 aaKnown RBP11.59□□□□□ -0.55
GCN1-206ENST00000549815 RABL3Q5HYI8 236 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 INTS11Q5TA45 600 aaKnown RBP11.59□□□□□ -0.55
GCN1-206ENST00000549815 KRT80Q6KB66 452 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 TTC33Q6PID6 262 aaPredicted RBP11.59□□□□□ -0.55
GCN1-206ENST00000549815 SLC35D2Q76EJ3 337 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 SPATA21Q7Z572 469 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 CDK20Q8IZL9 346 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 ZCCHC24Q8N2G6 241 aaKnown RBP11.59□□□□□ -0.55
GCN1-206ENST00000549815 ARIH2OSQ8N7S6 290 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 OR6N1Q8NGY5 312 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 FGFBP3Q8TAT2 258 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 NEU4Q8WWR8 484 aaPredicted RBP11.59□□□□□ -0.55
GCN1-206ENST00000549815 TMEM120AQ9BXJ8 343 aa11.59□□□□□ -0.55
GCN1-206ENST00000549815 SLC19A3Q9BZV2 496 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms