RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 APMAPQ9HDC9 416 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 FRRS1LQ9P0K9 344 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 PRR19A6NJB7 356 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 MAP3K8P41279 467 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 WASP42768 502 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 LIPNQ5VXI9 398 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 SHEQ5VZ18 495 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 ELP2Q6IA86 826 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 OR5T3Q8NGG3 340 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 ATOH1Q92858 354 aaPredicted RBP12.51□□□□□ -0.41
HDAC7-228ENST00000548938 ALG12Q9BV10 488 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 TRIM2Q9C040 744 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 IGFLR1Q9H665 355 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 MRM2Q9UI43 246 aaKnown RBP12.51□□□□□ -0.41
HDAC7-228ENST00000548938 PRELID3BQ9Y3B1 194 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 EML5Q05BV3 1969 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 A0A087WV62 115 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 GGT3PA6NGU5 568 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 TMEM127O75204 238 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 UPK3AO75631 287 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 EML2O95834 649 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 CSF1P09603 554 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 SMIM10L1P0DMW3 83 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 MAPK3P27361 379 aaPredicted RBP12.5□□□□□ -0.41
HDAC7-228ENST00000548938 PRICKLE4Q2TBC4 344 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 SLC35D3Q5M8T2 416 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 LEG1Q6P5S2 330 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 LRRN1Q6UXK5 716 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 LINC00114Q6XXX2 140 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.5□□□□□ -0.41
HDAC7-228ENST00000548938 BIVMQ86UB2 503 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 MCATQ8IVS2 390 aaKnown RBP12.5□□□□□ -0.41
HDAC7-228ENST00000548938 OR4N2Q8NGD1 307 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 OR8S1Q8NH09 359 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 SLC25A28Q96A46 364 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 SMIM10Q96HG1 83 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 WDR13Q9H1Z4 485 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 SLC25A32Q9H2D1 315 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 EXO5Q9H790 373 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 MKKSQ9NPJ1 570 aaPredicted RBP12.5□□□□□ -0.41
HDAC7-228ENST00000548938 RXFP3Q9NSD7 469 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 HPF1Q9NWY4 346 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 ZNF230Q9UIE0 474 aaPredicted RBP12.5□□□□□ -0.41
HDAC7-228ENST00000548938 ZNF175Q9Y473 711 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 C2orf16Q68DN1 1984 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 ATG2AQ2TAZ0 1938 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 SMAD9O15198 467 aaKnown RBP12.5□□□□□ -0.41
HDAC7-228ENST00000548938 GLCEO94923 617 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 CD3DP04234 171 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 CSRP1P21291 193 aaKnown RBP12.5□□□□□ -0.41
HDAC7-228ENST00000548938 MC2RQ01718 297 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 MGAT2Q10469 447 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 ALKBH1Q13686 389 aaKnown RBP12.5□□□□□ -0.41
HDAC7-228ENST00000548938 MPPED2Q15777 294 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 ODF4Q2M2E3 257 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 DPY19L2P2Q6ZN68 376 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 KRT77Q7Z794 578 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 ZNF227Q86WZ6 799 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 OR51A4Q8NGJ6 313 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 OR2A5Q96R48 311 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 BARX1Q9HBU1 254 aaPredicted RBP12.5□□□□□ -0.41
HDAC7-228ENST00000548938 RASL12Q9NYN1 266 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 PLCL2Q9UPR0 1127 aa12.5□□□□□ -0.41
HDAC7-228ENST00000548938 RFPL4AA6NLU0 287 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 RFPL4AL1F8VTS6 287 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 CTAG2O75638 210 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 AK1P00568 194 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 EGFP01133 1207 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 IGKV1D-16P01601 117 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 STK11Q15831 433 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 FAM220AQ7Z4H9 259 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 BPIFCQ8NFQ6 507 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 OR51D1Q8NGF3 324 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 CCDC74AQ96AQ1 378 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 TAS2R3Q9NYW6 316 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 TRAV18A0A075B6X5 111 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 TRBV5-5A0A0J9YX44 114 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 EIF4E2O60573 245 aaKnown RBP12.49□□□□□ -0.41
HDAC7-228ENST00000548938 AKAIN1P0CW23 69 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 CDKN2AP42771 156 aaKnown RBP12.49□□□□□ -0.41
HDAC7-228ENST00000548938 HYAL4Q2M3T9 481 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 LY6G6FQ5SQ64 297 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 PDSS1Q5T2R2 415 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 NKAIN2Q5VXU1 208 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 SLC6A19Q695T7 634 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 ULK3Q6PHR2 472 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 DGAT2L6Q6ZPD8 337 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 NARS2Q96I59 477 aaKnown RBP12.49□□□□□ -0.41
HDAC7-228ENST00000548938 NKX3-1Q99801 234 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-228ENST00000548938 ULBP3Q9BZM4 244 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 POFUT1Q9H488 388 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 KIR3DX1Q9H7L2 352 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 STEAP1Q9UHE8 339 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 SLC6A5Q9Y345 797 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 ZNF337Q9Y3M9 751 aa12.49□□□□□ -0.41
HDAC7-228ENST00000548938 A0A1W2PP55 124 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 UBBP0CG47 229 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 UBCP0CG48 685 aaKnown RBP12.48□□□□□ -0.41
HDAC7-228ENST00000548938 FCARP24071 287 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 RPS27AP62979 156 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms